Methanosarcina barkeri Fusaro: Mbar_A2710
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Entry
Mbar_A2710 CDS
T00271
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mba
Methanosarcina barkeri Fusaro
Pathway
mba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mbar_A2710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mba03400
]
Mbar_A2710
DNA repair and recombination proteins [BR:
mba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mbar_A2710
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mbar_A2710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
nSTAND3
AAA_22
DnaJ_CXXCXGXG
AAA_25
BCA_ABC_TP_C
RsgA_GTPase
Viral_helicase1
AAA_33
AAA_14
AAA_18
SLFN-g3_helicase
cobW
T2SSE
AAA_23
ATPase
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AAZ71614
UniProt:
Q468S8
LinkDB
All DBs
Position
1:complement(3440912..3443938)
Genome browser
AA seq
1008 aa
AA seq
DB search
MKNIIIKGAREHNLKNITVELPRDKLIVITGVSGSGKSTLAFDTVYAEGQRRYVESLSAY
ARQFLGLMNKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGTPYC
PTHNIKIESQSPEKIADSLSRECEGMITILAPVVRQKKGTYQQLFRELNSEGFTRMRVNG
EIHRTDDEITLDRYKKHDIEVVVDRLDPSEDRSRLVEACENALNKADGLLIAVDSEGKDH
LYSSNMACPVCGMAFEELQPRMFSFNSPFGACEACNGLGIKMEFDPDLIIPNKKLCLADG
AVALYRNYLDSYRSQHLAAVAKHFGFDIFTPIEDLTDEQYNALMYGSDELMQFSMSMKNG
DAHWSHKGTWEGLLPQSERLYSQTKSEYRRKELEKFMQVKPCPKCEGKRLKEKVLAVKFG
GKSIVDVSNLSILECIQFFENVELSEKEKEIAKQVLKEIRSRLGFLEHVGLGYLTLSRGA
GTLSGGEAQRIRLATQIGSNLMGVLYVLDEPSIGLHQRDNERLIRTLKTLRDLGNTLIVV
EHDEDTIWAADYVLDIGPGAGVHGGYVVAEGTPEEIEKNPESLTGQYLSGEKQIKPPALR
RHSDAFLRLKGCRANNLKDIDVNIPIGVLTVVTGVSGSGKSTLIYDTLYKALMKKINKSS
VTPGDYDELVFDSEIDKVIVIDQSPIGRTPRSNPATYTKVFDAIRQAFAETKEAKIRGYK
NGRFSFNVKGGRCEACQGEGLIKIEMNFLPDVYIECEECKGKRYNRETLEVKYRGKSIAE
VLDMTVEEAAEHFENIPSIKRKLDTLIRVGLGYIKLGQSSTTLSGGEAQRIKLTRELSKK
CTGKTIYLLDEPTTGLHFHDVKKLIAVLNRLVAKGNTVVVIEHNLDVIKSADYIIDLGPE
GGNAGGEIIAEGTPEEVSTVQGSYTARFLAPKLSQSYLDMSGEEPVEAVFEEGEEFEADY
EDLNDNQNEEDSEDFEEDSEEDSEDSEDSRGFKHSKHRADNAFQEQLI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatattattattaaaggggcacgggaacacaacctgaaaaacatcacggttgaa
ctcccgcgggacaaattaatcgttattacaggggtatcaggctcagggaaatctaccctg
gcttttgacacagtttatgccgaagggcagcggcgctatgttgagtcactctcggcttat
gcgcggcagttcctcgggcttatgaacaagccggatgtggacagcattgaggggttatct
ccggcaatatccattgaacagaaaacgacctcgaaaaatcccaggagtacggttgggaca
gttactgaaatttatgattacttgaggctgctttttgcaagagtcggtactccttactgt
ccgacccacaacataaaaatcgagtctcaatctcctgaaaagattgcggacagcctgagc
agggaatgtgagggtatgattaccatcctcgcacctgtagtccgccagaagaaagggaca
taccagcagctcttcagagaactaaacagtgaaggcttcacccggatgagggtaaacggc
gagattcacaggactgacgatgagattacccttgaccgctacaagaaacatgatatcgaa
gtcgtggttgaccggttggacccttcagaagaccgctcaaggcttgttgaggcctgtgaa
aatgctctaaataaggcagatgggctcttaatcgcggttgattcggaaggaaaagaccac
ctttattcttcaaatatggcctgccctgtttgcggcatggcttttgaagaactccagccc
aggatgttttctttcaacagtcctttcggagcctgcgaggcctgcaatgggctcgggatc
aagatggagttcgatcctgacctcattattccgaataaaaagctctgccttgcagacgga
gctgttgctctgtacaggaactatctggacagttaccggagccagcaccttgcagccgtg
gcaaagcatttcggttttgacatatttactcctattgaggacctcacagatgagcagtat
aatgctctcatgtatggctcggacgaacttatgcagttcagtatgagcatgaagaacggg
gatgcccactggtctcataagggtacctgggaagggttgctcccgcagtccgagaggctg
tacagccagacaaaatctgaataccgccgaaaagaacttgaaaaattcatgcaggttaag
ccctgtccaaaatgtgaaggcaagcgcctgaaggaaaaagtgcttgcagtaaagttcggc
gggaaatccattgtagatgtatccaatctctcaattctggagtgtatacagtttttcgaa
aacgtggagctctcggaaaaggaaaaagagatcgcaaaacaggtcttaaaagaaattcgc
tccaggctcggttttttagagcatgtagggctcggctatcttactctttcgcgaggtgca
ggcactctctcaggcggagaagcccagcgaatccgattggctactcagattggctcaaat
ctcatgggcgtactctatgttctcgacgaaccctcaatagggctgcaccagagagacaat
gagcgtcttatccgtactctcaagaccttgcgggaccttggaaatacccttattgtcgtg
gaacatgatgaagatactatatgggctgcggactatgttcttgatattgggccaggtgca
ggcgttcatggaggttatgtggtagccgaaggcacccctgaagaaattgagaaaaatccg
gaatccctgacaggtcagtacctctcaggagaaaaacagataaaaccgcctgcccttcgc
cgtcatagtgacgcgttcttaaggcttaaaggatgcagagcgaacaacctgaaggatata
gacgtgaatattcctataggggttctgaccgtagttacaggggtctcaggttccgggaag
tcaacgctaatttatgataccctgtacaaagccctgatgaaaaagataaataaatcaagt
gtaacaccaggggactatgacgagcttgttttcgattccgagatcgacaaggtaattgtt
attgaccagagccccatcggcaggactcctcgctcaaatcctgccacctataccaaggtc
tttgatgccataaggcaggcttttgccgaaacaaaggaagcaaaaatcaggggttataag
aatgggcgtttctccttcaacgtaaaaggagggcgctgtgaagcctgccagggagaagga
ctgataaaaatcgaaatgaatttcctgcctgatgtatacatcgagtgtgaggaatgcaag
ggtaaacgctacaaccgtgaaactcttgaggtaaagtacaggggcaagtcgattgctgaa
gtcctggatatgaccgtcgaagaggctgccgaacactttgaaaacattccttcaatcaaa
cgcaaactcgatactttaataagagttggactgggctatatcaaactcggccagagctca
acaacgctttccggtggggaagcccagaggatcaagctgacaagggaactctccaaaaag
tgtaccgggaagacgatttacctccttgatgaacccacaaccgggcttcacttccatgac
gtcaaaaaactcatcgcagttctcaacaggcttgtagcaaaaggaaacacagtggttgta
atagagcataacctggatgtaatcaaatcagcagactatatcattgatctgggtcccgaa
ggcgggaacgcaggtggagaaattattgccgagggaactccggaggaagtgtccactgtt
cagggaagttatactgcacgcttccttgctcctaaactttcacagtcatatctcgacatg
tcgggagaagaacctgttgaagctgtttttgaagaaggggaagagtttgaggccgattat
gaagatcttaatgataatcagaatgaggaggattccgaagactttgaagaagactcggag
gaagactccgaagactccgaagactccagaggtttcaaacacagtaaacatagagccgac
aatgcatttcaggaacaattgatttaa
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