Candidatus Methylopumilus turicensis: BN1209_0052
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Entry
BN1209_0052 CDS
T03844
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbac03016
]
BN1209_0052 (truB)
Enzymes [BR:
mbac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BN1209_0052 (truB)
Transfer RNA biogenesis [BR:
mbac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN1209_0052 (truB)
Prokaryotic type
BN1209_0052 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
CEN55110
UniProt:
A0A0B7IX84
LinkDB
All DBs
Position
1:53071..53991
Genome browser
AA seq
306 aa
AA seq
DB search
MAQFKRVKRNINGVLLLDKPIGFSSNQALQKVKWLFQAAKAGHTGTLDPLATGLLPICLG
EATKFAQYVTDADKTYIATVKFGATTTTGDAEGEVIATGDVNFTRQQLESVCQSFIGEIS
QVPPMYSALKFEGKALYEYAREGVDIERQSRQVTITDITIHRFDADVAEITVNCSKGTYI
RTLAEDIGNALGCGAHLIGLRRIETAGYQLADAITLEQLEQRIKNTPVESLQSLILPIDS
AIAYLPAVTLNGDAAHYLMQGQAVWVSGQIPHGEIRLFDENSRFLGLGFLQDDGKIAPKR
LMRDFS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattcaaaagagttaaacgcaatatcaacggcgtgttgttgctcgacaagccc
atcggtttttcatccaatcaagccttacaaaaagtaaaatggttgttccaagcagccaaa
gctgggcacaccggcacattagatccgcttgcaactggcttgctacctatttgcttgggt
gaggcgactaagtttgcacaatacgtgactgatgcagataaaacctatatagcaaccgta
aagtttggcgccacgacaacaacgggcgacgccgagggtgaggtaattgcgaccggtgat
gtgaattttactcgccagcagcttgagtccgtctgccaatcttttatcggcgaaatcagc
caggtcccaccgatgtattcagcgttgaagttcgaaggcaaggccttgtatgagtatgcg
cgtgaaggggttgatattgagcgccaatcacggcaggtcaccatcacagacatcaccatt
catcgttttgatgctgatgttgccgaaataacggtgaattgcagtaaaggcacctatatt
cggaccttagccgaagatattggcaacgcgcttggttgtggtgctcacttaatcggtttg
cgaagaattgaaacggcgggctatcagttagctgatgcgattacgcttgagcaactagaa
cagagaattaaaaacacgcctgtcgagtctttgcagagcttaattttgccaattgactct
gccattgcttatttaccagcagtgaccctaaatggcgatgccgcacactatctcatgcaa
ggccaagccgtgtgggtttcaggacaaattccgcatggtgaaatccgtttgtttgatgaa
aattcacgatttcttggattgggatttttacaggacgatggaaaaatcgcacctaagcgc
ttaatgcgagatttttcttaa
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