Candidatus Methylopumilus turicensis: BN1209_0121
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Entry
BN1209_0121 CDS
T03844
Symbol
yhbJ
Name
(GenBank) hypothetical protein; putative nucleoside triphosphate hydrolase domain
KO
K06958
RNase adapter protein RapZ
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbac03019
]
BN1209_0121 (yhbJ)
Messenger RNA biogenesis [BR:
mbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN1209_0121 (yhbJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_18
AAA_28
nSTAND_NTPase5
AAA_16
AAA_33
T2SSE
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CEN55175
UniProt:
A0A0B7IXG8
LinkDB
All DBs
Position
1:complement(110367..111206)
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AA seq
279 aa
AA seq
DB search
MQLIIVTGLSGSGKSVVLKALEDTGYYCVDNLPATLLPQIYENLKGTQNRVAISTDTRSG
ALEALPENIKKLKAVGVNVQVLFLESTKQALVKRFSETRRRHPLSNEDITLGESIELERE
LLAPLSELGHHIDTSELSANTLRGWVKDFVAQENKEITLLFASFGFKHGIPLDADFVFDV
RCLPNPHYDPLLRPMTGRDAPVKAFLAQQPMVHDMYQDIENFVTRWLPSFVQENRSYLTI
AIGCTGGQHRSVHIVEELGKHFSQQQQVLIRHRELELSL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgattatcgtcacaggcctatctggctcaggtaaaagcgtggtcctcaaagcc
cttgaggacactggctattattgcgtggacaatctgcccgcaaccctgctcccgcaaatc
tatgaaaatttaaaaggcactcagaatcgagtggcgattagcactgataccagaagcggg
gcattagaagccctgcctgagaatattaaaaaattaaaagctgtaggcgttaacgttcaa
gtgttgtttcttgaatcgaccaaacaagctttagttaaaagatttagtgaaacgcgtcgg
cgacacccactcagcaatgaggatattacgctcggagaaagcatagaacttgagcgtgaa
ttattagcaccactttctgagttgggacatcacattgacacgagtgaattaagcgcgaac
accttacggggctgggtgaaagattttgtcgctcaagaaaataaagaaatcacgctctta
ttcgcctcttttgggtttaagcatggcattccgcttgatgcagattttgtatttgatgtg
cgctgcttgccaaatccacattacgacccactactcagaccaatgacaggccgtgatgcg
ccggtgaaagcttttttagcgcagcaacctatggtgcatgatatgtaccaagacattgaa
aactttgtcacacgctggttaccaagcttcgtccaagaaaatcgtagttacctcaccatt
gccattggttgcacgggtggacaacatcgctctgttcatattgttgaagagctgggcaaa
cacttttcacagcaacaacaagtcttaatcagacatcgagaactggaactatctttatga
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