Candidatus Methylopumilus turicensis: BN1209_0265
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Entry
BN1209_0265 CDS
T03844
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN1209_0265 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbac03021
]
BN1209_0265 (rpoA)
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_0265 (rpoA)
Enzymes [BR:
mbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN1209_0265 (rpoA)
Transcription machinery [BR:
mbac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN1209_0265 (rpoA)
DNA repair and recombination proteins [BR:
mbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN1209_0265 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
CEN55319
UniProt:
A0A0B7ISK6
LinkDB
All DBs
Position
1:231012..231995
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSPTEYLKPRVVDVEVISPLRARVTLEPMERGFGYTLGNALRRVLLSSIPGFAITEVK
IDGVVHEYSTIDGVQEDVVDILLNLKGVALKLNNKSETVLTLSKSSEGVVTAGDFETGHD
AEIFNPNHVIAHLTKGGKLNLEVKVEMGRGYQPVPVRQKTDEDRVLGFIMVDASFSPINK
VSYFVESARVEQRTDLDKLIMDVETNGVMEPEQAIRDAARILIGQLSVFADLEGAPTEVE
VKQVPQVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRGENELLKAPNLGRKSLNE
IKDVLASKGLTLGMKLENWPPVGLEKV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtccgactgaatatttgaagccacgtgtagtggatgttgaggttatttca
ccattgcgtgcacgtgttactttagagcctatggaacgtggttttggttatacacttggt
aatgctctccgccgtgtattgctttcatcaattccaggcttcgcaattacagaagtgaaa
attgatggtgttgttcacgagtattcaaccattgatggcgttcaagaagatgtcgttgat
atcttgttgaaccttaaaggtgttgcactaaagcttaataataaaagtgaaacagtttta
acattaagtaaatcatcagaaggcgtagttacagctggtgatttcgaaactggtcatgat
gctgaaatctttaatccaaatcatgtaattgctcacctgactaaaggtggtaaattaaat
ttagaagttaaagttgaaatgggtcgtggttatcaaccagttccagttcgtcagaaaact
gatgaagatcgtgtacttggttttattatggttgatgcttcatttagcccaatcaacaaa
gttagctatttcgtagaaagcgctcgtgttgaacagcgaactgacttggacaaacttatc
atggacgttgaaacaaacggtgtgatggaacctgaacaagcgattcgtgacgcagcacgt
attttgattggccagttatctgtatttgccgatcttgagggtgctccaacggaagttgaa
gttaaacaggtgccacaagttgatcctatcttgttgcgcccggtagatgatttagagtta
acggttcgttctgcgaactgcttaaaggctgaaaatatttactatattggtgatttgatc
caacgcggtgaaaatgagttattgaaggcgcctaatttgggccgtaaatcacttaatgag
attaaggatgtattagcatctaaaggtctcacgttaggtatgaaattagagaactggccg
ccagttggcctggaaaaagtataa
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