Candidatus Methylopumilus turicensis: BN1209_0290
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Entry
BN1209_0290 CDS
T03844
Name
(GenBank) Helix-turn-helix, Fis-type
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbac03000
]
BN1209_0290
03036 Chromosome and associated proteins [BR:
mbac03036
]
BN1209_0290
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_0290
Transcription factors [BR:
mbac03000
]
Prokaryotic type
Helix-turn-helix
Other families
BN1209_0290
Chromosome and associated proteins [BR:
mbac03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BN1209_0290
DNA repair and recombination proteins [BR:
mbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BN1209_0290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Xre-like-HTH
HTH_28
HTH_50
HTH_23
UBA_At5g58720
Phage_NinH
UPF0175
HTH_17
Motif
Other DBs
NCBI-ProteinID:
CEN55344
UniProt:
A0A0B7ISM9
LinkDB
All DBs
Position
1:complement(254265..254501)
Genome browser
AA seq
78 aa
AA seq
DB search
MSSKCELAMSVELALNEYFKDLDGQPPHAVYDMVLACIEKPMIEHIMKRAGGNQSKAAEI
LGLNRNTLRKKLQQYNIE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaatgtgaactagcgatgagcgtggagcttgcgctcaatgagtatttcaag
gatttagacggtcaaccaccgcatgcggtatatgacatggtgcttgcttgtatcgagaaa
ccaatgattgagcacattatgaaacgtgctggtggcaaccaaagcaaagctgctgaaatc
ttgggtttaaaccgcaacaccctcagaaaaaaattacagcaatacaatattgaataa
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