Candidatus Methylopumilus turicensis: BN1209_0642
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Entry
BN1209_0642 CDS
T03844
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_0642
Enzymes [BR:
mbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BN1209_0642
DNA repair and recombination proteins [BR:
mbac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BN1209_0642
Prokaryotic type
BN1209_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_primase_lrg
Motif
Other DBs
NCBI-ProteinID:
CEN55685
UniProt:
A0A0B7ITS8
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All DBs
Position
1:complement(604244..605470)
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AA seq
408 aa
AA seq
DB search
MTPIKINIPVSRSERIKEIKALFPHHTGANLREDWVGGRTEGLKRLSNIKPERYEKSRNY
LNGEVTYLSPYLRHGCISLAEAITFAQEKSTRGNDKLLFEFAWRDYWRQIWYHAGDRIHS
EMEAPKVELKRNSLPRIVSEGNTKLPCIDHFVNTLRETGYLHNHARMWLSSYLIHWLGVD
WKIAANWMHDMLLDGDQASNTLSWQWVASTFGSKPYFFNQENLSKYTGNQLCNGCQAVCP
FKKSYEALDASLFRPTTAPARITSPDYSPINFKHPGNASVILFTDEMLSPAHALYQRNQK
KIFVFDPIHYKNWSLNRLQFMADCLAEMPEVEVWTGDTLALLEILGCGHVETQSTPNSML
RHLLSKCSVTYIEEPAIYSDVTKEKLHARGLMRFSKYWNFVGEEILKR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacccccattaaaattaatattcccgtatcgagatctgaacgtatcaaagagatcaaa
gcgctgtttcctcatcatacgggagccaacttaagggaagattgggttggtgggcgcact
gaaggcttaaaaagactatccaacattaaacctgagcgttacgaaaaatctcgtaactat
ctcaatggcgaagtgacttacttgtcaccttatctgagacatgggtgtatttcattagcc
gaggcgatcacttttgcccaagaaaaatcaacgagaggcaacgataaattgctttttgag
ttcgcttggcgagattattggcgtcaaatttggtatcacgctggtgatcgcatccattcc
gaaatggaagcacctaaagtcgaattaaagcgcaattcactcccccgcattgtgagcgaa
gggaacaccaaattaccgtgcatagaccacttcgttaacacccttcgagagacgggttat
cttcacaaccacgcaagaatgtggctttctagttatctgattcactggcttggggttgat
tggaaaattgctgcaaattggatgcatgacatgttacttgatggagaccaagcatctaac
accctctcttggcaatgggtagcctccacttttggtagcaagccctactttttcaatcaa
gaaaacctgagtaaatatacgggcaatcaactatgtaacggctgtcaggctgtttgcccc
tttaagaagagctacgaggcgctggatgcctcgctttttagaccaaccacagcaccagca
agaataacttcgccagattactcaccaataaacttcaagcatccgggaaatgcatccgtt
attttattcaccgacgaaatgctttcgccagcgcacgctctttatcaacgtaaccaaaag
aagatattcgtatttgatccaatacattataaaaactggtcattgaatcgattacagttt
atggccgactgtctagctgaaatgccggaggtggaagtatggacaggtgacacattggcg
ttacttgagatattaggttgcggtcatgtagagactcagtcgacgccaaatagtatgtta
aggcacttattatctaagtgcagtgttacgtatattgaagaacctgctatttattccgac
gtcacaaaagaaaagcttcatgcaagagggttgatgcgtttctctaagtactggaatttc
gttggggaagagatacttaaacgttga
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