Candidatus Methylopumilus turicensis: BN1209_0645
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Entry
BN1209_0645 CDS
T03844
Name
(GenBank) Deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_0645
Enzymes [BR:
mbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
BN1209_0645
DNA repair and recombination proteins [BR:
mbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
BN1209_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
CEN55688
UniProt:
A0A0B7IX87
LinkDB
All DBs
Position
1:607887..609413
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AA seq
508 aa
AA seq
DB search
MKKLILVLGDQLDFNSVALRNFDPSTDEVMMIESRHESTYVWSHKAKIALFLSAMRHFAQ
TLESQNIPVTYIKDSDANIVDVLKQHILDNQVTHLECVEPGEYRLKISLEHLARDLDIEL
IMHHDDHFYCSVSEFKAWVADKKELRLEYFYRYMRKKHQVLMDEDSQPLGGQWNFDDQNR
KPYSKNGPGLIQDPVVFEPDAMTREVFEFVEKSYPQHPGSLAHFAWPVTREQALVALDFF
VTHRLAQFGTYQDAMWKETPFGWHSMLSPSLNLKLINPREVIERALAAYQTDALDLSTVE
GFIRQIIGWREFVRGIYYLDMPQMAEANFYQHQRSLPSWYWTGDSKMNCMKDAIGQTLKY
GYAHHIQRLMVTGNFALLAEVLPQQVSDWYLAVYVDAIEWVELPNVVGMALFANGGRFTS
KPYVASGAYVKRMSNYCNGCQYKPEVRYGDQACPMTTLYWNFLMKHQAAFNQNPRTRLMT
ANLSKISIEDQTHIQIHADKILNNLDAI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaatactagtcctgggtgatcaactggatttcaatagcgtggcattgcgt
aattttgatccaagtacagatgaagtcatgatgattgagtctcgacatgagtccacttat
gtttggtcacataaagccaaaatcgcattatttttatcagcgatgcgccattttgctcaa
acccttgagtcccaaaatattcctgtgacttacatcaaagattctgacgcgaatattgtt
gatgttctcaagcaacacatcttagacaatcaagtcacgcacttggaatgcgtcgaacct
ggtgagtatcgcctaaaaatttccttagagcatttagcacgcgacttggatattgaactc
atcatgcatcatgatgatcatttttattgcagtgttagtgagtttaaagcgtgggtagcc
gataaaaaggagctgcgactagagtatttttatcggtatatgcgaaaaaaacatcaggta
ctgatggatgaagattctcagcccttgggtgggcagtggaattttgatgatcaaaataga
aagccatactcaaagaatggtccaggtcttattcaggatcctgtagtttttgaaccggat
gcgatgacgcgtgaggtgtttgagtttgttgagaaaagctatcctcaacaccctggctca
cttgcccatttcgcctggccagtcacccgtgagcaggcgctagtggctttagattttttt
gtgacgcatcgtcttgctcaatttggtacttatcaagacgccatgtggaaagaaacgcct
tttggttggcactctatgctctcgcctagcttgaatcttaaactaattaatccgagagaa
gtcattgagcgtgcattagcggcttaccaaaccgatgccttagatttatctacagtagag
ggttttattaggcagattattggatggcgagagtttgttcgaggcatttactatctcgat
atgccgcaaatggcagaagcaaacttttaccagcatcagcgctctttgcccagttggtat
tggacgggtgacagtaaaatgaactgtatgaaggatgctatcgggcaaacactcaagtat
ggctatgcgcaccatattcaacgtttaatggtcacaggcaactttgcactacttgcagaa
gtattgccccaacaagtctccgattggtatttggctgtctacgtagatgcaattgagtgg
gtcgagttacccaatgtcgtgggcatggccctatttgcaaacggtggacgttttacgagt
aagccttacgtcgcaagtggcgcctatgtgaaacgaatgagtaattattgcaatgggtgt
cagtacaagcctgaagtgagatatggcgatcaagcttgcccgatgaccacattgtattgg
aattttttaatgaagcatcaagctgcatttaatcaaaatccaaggacacggttaatgacc
gcgaatctttctaagattagtattgaagatcaaacgcacattcaaatacatgccgataaa
attttgaacaatcttgatgcgatttag
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