Candidatus Methylopumilus turicensis: BN1209_1022
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Entry
BN1209_1022 CDS
T03844
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbac03032
]
BN1209_1022 (hupB)
03036 Chromosome and associated proteins [BR:
mbac03036
]
BN1209_1022 (hupB)
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_1022 (hupB)
DNA replication proteins [BR:
mbac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN1209_1022 (hupB)
Chromosome and associated proteins [BR:
mbac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BN1209_1022 (hupB)
DNA repair and recombination proteins [BR:
mbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BN1209_1022 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF937
ACP_syn_III_C
HU-CCDC81_euk_2
UBA_7
Motif
Other DBs
NCBI-ProteinID:
CEN56063
UniProt:
A0A0B7J075
LinkDB
All DBs
Position
1:complement(1001144..1001416)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDQIAKAAGISKAAAGRALDATTSAVTGALKKGDLVTLIGFGTFYVGKRAARNG
RNPRTGATISIKAANSPKFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcagagctaatcgaccaaatcgcaaaagccgctggaatctcaaaggctgca
gcaggccgtgcattggatgcaacaacatcagcagtaactggcgcattgaaaaaaggtgat
ttggttacacttatcggtttcggtacattttatgtaggtaagcgtgctgctcgtaacggc
cgtaatccacgtactggtgcaacaatttctatcaaagcagctaattctcctaaatttagg
gctggtaaagcgctcaaggatgctgtaaactag
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