Candidatus Methylopumilus turicensis: BN1209_1131
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Entry
BN1209_1131 CDS
T03844
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbac03009
]
BN1209_1131 (ycaO)
Ribosome biogenesis [BR:
mbac03009
]
Prokaryotic type
ribosomal protein modification factors
BN1209_1131 (ycaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
CEN56171
UniProt:
A0A0B7IV68
LinkDB
All DBs
Position
1:1106057..1107856
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AA seq
599 aa
AA seq
DB search
MLTAIFLFTLLESHAMQNTPNTSTETFIPSKDASLEYSIKTLQAKLLDIGFHVEERSWLN
EIEGIWSVHVTDRDCTRLFSNGKGASQLAARASALGEYFERLSTNYFWTHFYLGEAISNQ
DYVHYPNEKWFPLAGDKWPAGLLNKELHKFYNPEGTVSATKLIDLNSGNAKRGICAIPYT
RLRDNEVAYFPVNLIGNLYVSNGMSAGNTLKEARTQALAEIFERDIKYKIIREGICLPDV
PEAVINRYPRIAAGIKGLRDAGYGILVKDASLGGQYPVMNVTLLHPEDQGCFASFGAHPR
FEVALERALTELLQGRAIDGLKNFVAPGFDMEEIADSQNLEIHFVDSSGVISWNFLRDTP
DYEFVDWNFGTTTDEDYQWCCDTIHASGHEIYISDFTHLDVYACRIFVPGMSEIYPVEEL
EWENNSVGNLVRPALLRTQDLSQAESETLLETLLDLELADELPVTTLIGLAADAGSVWAD
LRVGELKALLGLAVGDVDVILEGCDWISQFGELPEKRARVYRCIADLVQLQEMTALDHTK
PFNANLALMYGTETLQQAQQLLSRESRYFGLNNLGANMEGSEMHKQLLLAYHKVNAKKH
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctaacggccatttttttatttactttgcttgaaagccacgcgatgcaaaacactcca
aacaccagcaccgaaacctttattccaagcaaagatgcttcgcttgaatattcgattaaa
acgctacaagccaagcttttggatatcggctttcacgtagaagagcgctcttggctcaat
gaaattgaaggcatttggtcggtgcatgtgacggatcgtgattgcacacgtttatttagc
aatggcaaaggcgcatcgcagcttgcagcaagagcgagtgcgcttggtgaatactttgag
cgcctcagcaccaattacttttggacgcacttttacttgggtgaagccataagcaatcaa
gattatgtgcattacccaaatgaaaaatggtttccgctggctggcgacaaatggcctgct
ggcttgcttaacaaagagctgcacaaattctacaacccagaaggcactgtttcagcgact
aagctcattgacttgaactctggtaacgccaaacgcggtatttgcgcgattccttacaca
cgcttgcgggataatgaagtagcttacttccctgtgaatttgattggtaacttatacgtg
agcaacggcatgtccgccggcaacacgctcaaagaagcccgcacgcaagcattggcggaa
atttttgaacgcgatattaaatataaaatcattcgtgaaggcatttgcttgccagatgtt
cctgaagcagtcatcaaccgctatcctcgcatcgccgctggcattaaaggcttgcgcgat
gcaggctatggcattttggtgaaagacgcctcactgggtggccaatatcctgtgatgaac
gtcaccttattgcacccagaagaccaaggctgtttcgcgagctttggtgcgcacccacgc
tttgaagtggcgctagagcgtgcattaaccgagcttctgcaaggtcgtgcaatagatggc
ctcaagaattttgttgcgccaggttttgatatggaagaaatcgccgactcacaaaaccta
gaaattcattttgtagattcaagcggcgtgattagctggaacttcctacgcgacacgcca
gattatgagtttgtggattggaactttggcaccacaacggatgaagactatcaatggtgc
tgcgataccatccacgcgagcggtcacgagatttatatttcagacttcacccacttagat
gtttatgcatgccgtatttttgtgccaggcatgtcagaaatctaccccgtggaagagctt
gagtgggaaaacaactccgtgggcaacttggtgcgccctgctttgcttcgtacacaagac
cttagccaagcagaaagcgaaacgctattagagacattactagacctagagctggcggat
gaactccctgtgaccacacttattggccttgcggcagatgctggtagcgtttgggcagac
ttacgtgttggtgaactaaaagcattattaggcctagcggtgggtgatgttgatgtgatc
ttagaaggctgtgattggattagccaatttggcgaattgccagaaaaacgcgcccgcgtt
tatcgctgtattgccgacttagtgcaactacaagaaatgacagcactagaccacaccaag
ccatttaacgctaatttagccctcatgtatggcacagaaaccttgcaacaagctcagcaa
ttgcttagccgtgaatctcgttactttggcctgaataatctaggtgccaatatggaaggt
agcgagatgcacaaacagttgttattggcttatcacaaggtgaatgctaaaaagcattaa
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