Candidatus Methylopumilus turicensis: BN1209_1134
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Entry
BN1209_1134 CDS
T03844
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac00260
Glycine, serine and threonine metabolism
mbac00630
Glyoxylate and dicarboxylate metabolism
mbac00670
One carbon pool by folate
mbac00680
Methane metabolism
mbac01100
Metabolic pathways
mbac01110
Biosynthesis of secondary metabolites
mbac01120
Microbial metabolism in diverse environments
mbac01200
Carbon metabolism
mbac01230
Biosynthesis of amino acids
mbac01240
Biosynthesis of cofactors
mbac04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN1209_1134 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BN1209_1134 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN1209_1134 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BN1209_1134 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BN1209_1134 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BN1209_1134 (glyA)
Enzymes [BR:
mbac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BN1209_1134 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CEN56174
UniProt:
A0A0B7IYN2
LinkDB
All DBs
Position
1:1109910..1111157
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AA seq
415 aa
AA seq
DB search
MFSRAKTLSVVDPELAKYVELERVRQDEHIELIASENYTSPAVMEVQGSQLTNKYAEGYP
GKRFYGGCEYVDEVEKLAIERIKKLYGAEYANVQPHSGSQANQAVYFSILKPGDTIMGMN
LGHGGHLTHGSPANLSGKLFNIVPYGLNDKEEIDYDEMERIAIECKPKLLIGGASAYSLR
FDWERMAAIAKKVGAYFMVDMAHYSGLIAGGVYPNPVPHADFVTSTTHKTLRGPRGGIIL
AKAEFEKSINSYVFPGLQGGPLMHVIAGKAVAFLEALQPEFKTYQTQVLKNASVMAEELA
KRGLRIISGRTESHVFLVDLLPKGLTGKAADAALGLAHITVNKNSIPNDPESPFVTSGIR
IGSPAITTRGFKEEEARQVANLIADVLDNPTDEAVIAATKAKVHALTSRFPVYGA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccgagcaaaaacgttgagtgttgtagatcctgaattagcaaaatatgtagaa
cttgagcgcgttcgccaagatgaacatatcgaattgattgcttctgaaaattacaccagc
cctgctgtgatggaagtgcaaggctcacaactcaccaataaatatgctgaaggctatcca
ggcaaacgtttttacggtggctgtgagtacgtggatgaagttgaaaaacttgcgattgag
cggattaaaaaattgtacggcgctgaatatgccaacgtacagccgcactcaggctcacaa
gccaaccaagcggtttatttctcgatcttaaaaccaggtgacaccatcatggggatgaac
ctgggccatggcggccatttaacgcacggttcacctgctaacttatcaggcaagctgttc
aacatcgtgccttacggcttaaacgataaagaagaaatcgactacgacgaaatggagcgt
attgcgattgaatgcaagccaaaactgttgattggtggcgcttctgcatattcccttcgt
tttgactgggaacgcatggcagccatcgcgaaaaaagtgggcgcctatttcatggtggac
atggcgcattactcaggcttgatcgctggcggcgtttatccaaacccagtgccacatgct
gacttcgtcacttcaaccacgcacaaaacattgcgcggcccacgtggcggcattattttg
gcaaaagcggaatttgaaaaatcaatcaattcatacgtattccctggcttgcaaggcggc
ccattgatgcacgtcatcgcaggtaaagcggtggcattcttagaggcattacaaccagag
ttcaaaacttatcaaacgcaagtgttgaaaaatgccagcgtgatggcagaagagctagca
aaacgcggcttgcgcattatttcaggccgcacagaatctcacgtgtttttggtggactta
ctccctaaaggcttaacaggtaaagcggcggatgcggctttgggtttagcgcacattact
gtgaataagaactctattcctaacgatccagaaagcccatttgtgacgtctggcattcgc
attggctcaccagccattactacacgcggctttaaagaagaagaagcccgtcaggtggct
aatttgattgctgacgtattagataatccaaccgatgaagctgtgattgcggcaactaaa
gcgaaagtgcatgccttaacttcacgcttccctgtgtatggtgcctaa
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