Candidatus Methylopumilus turicensis: BN1209_1297
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Entry
BN1209_1297 CDS
T03844
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac00541
Biosynthesis of various nucleotide sugars
mbac01100
Metabolic pathways
mbac01250
Biosynthesis of nucleotide sugars
Module
mbac_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BN1209_1297 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mbac01005
]
BN1209_1297 (waaD)
Enzymes [BR:
mbac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BN1209_1297 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
mbac01005
]
Core region
BN1209_1297 (waaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
KR
NAD_binding_4
AAA_22
AAA_14
ApbA
Motif
Other DBs
NCBI-ProteinID:
CEN56335
UniProt:
A0A0B7IVS5
LinkDB
All DBs
Position
1:1296499..1297467
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AA seq
322 aa
AA seq
DB search
MIVITGGAGMIGSMIAWHLNHSGRDDLVIVDDIQHPEQWQNLVKRRYANYLDKSELACFL
AGKPKIDAIIHMGAISATTERDFNKLVQNNIRYSQFLWNWCTENKVPFLYASSAATYGAG
EQGYDDACDINTLRPLNGYGYSKQYFDQWALQQGAHKSPPQWQGFKFFNVYGPNEYHKER
MASVSFHTFNQFKAEGNVKLFKSHLAGYEDGMQLRDFVYVKDAAAAVVHFINNLCESGIY
NIGTGQARAFKDLASAVMTSMGKAPNITYIDMPEDLRGKYQYFTEAKMLKLADAGYTAKF
HTLEDGVRDYVQNYLLQADPYC
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatagtaataactggtggcgcaggcatgatcggcagcatgattgcatggcatctcaac
cattcaggccgagatgacttggtgattgtggacgacattcagcaccctgaacagtggcaa
aaccttgtgaaacgccgctacgccaattatctagacaaaagcgagcttgcttgcttttta
gcgggtaagcctaaaatcgacgccatcatccacatgggtgcgattagcgcgacgaccgag
cgcgacttcaataaattagtccaaaacaatattcgctacagccagtttttatggaattgg
tgtactgaaaacaaagtgccatttttgtacgccagttctgccgccacttatggtgccggc
gagcaaggctacgatgatgcttgcgacattaatacgcttcgcccactcaatggctatggc
tattcaaaacaatactttgaccaatgggccctgcaacaaggcgcgcacaaaagccctcct
caatggcaaggctttaagttttttaatgtgtatggccctaacgaataccacaaagagcgt
atggccagtgtctcgttccatacgtttaatcagttcaaagctgaaggcaacgtgaagtta
ttcaagagccatttagcgggctatgaagatggcatgcagttgcgtgattttgtgtatgtc
aaagatgcggctgcggcggttgtgcattttataaataacctgtgtgaatctggtatctac
aatatcggtacaggccaagcaagggcatttaaagaccttgcaagtgcagtgatgaccagc
atgggaaaagcaccgaacattacttatatcgacatgccagaagacctacgcggcaagtac
caatacttcaccgaagcgaagatgctcaaactcgcagacgctggctacacagcaaaattt
cataccctagaagacggtgtgcgtgactacgtgcaaaactatctcttgcaagctgaccct
tattgctaa
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