Candidatus Methylopumilus turicensis: BN1209_1340
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Entry
BN1209_1340 CDS
T03844
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbac03021
]
BN1209_1340 (rpoH)
Transcription machinery [BR:
mbac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN1209_1340 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_AsnC-type
UCR_14kD
KORA
HTH_PafC
HTH_10
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
CEN56378
UniProt:
A0A0B7J142
LinkDB
All DBs
Position
1:1337265..1338125
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AA seq
286 aa
AA seq
DB search
MTNALSLPIPSALDSLDQYMRTIKAFPVLTAEEELDYATRLKNNNDLEAAKALIVSHLRL
VASIARGYSGYGLPQADLIQEGNIGLMKAVKRFDPTRGVRLVSFAMHWIKAEMHEYIVRN
WRLVKVATTKAQRKLFFNLRSMKTGAGSLQPDEVAHIARELKVKPEEVLEMESRLGGHEI
SLEGNSDDDSEDTFSPIAYLEDEHPEPSEMLSAIEQEHLQTTGLASALASLDERSRRIVE
ARWLTQDSSATLHDLADEFGVSAERIRQIEQKAMEKMKIALAAHAH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgcattgagcttaccgattccatcggctttagatagcttggaccagtacatg
cgcaccatcaaagcctttcctgtgctcaccgcagaggaagagctggattacgcaacgcgc
ctgaaaaacaataacgaccttgaggctgcaaaagcgctcatcgtttcacacctacgttta
gtggcgagcattgcgcgtggttactctggctacggcttgccgcaagccgatttaattcaa
gaaggcaatatcggcctaatgaaggcggtaaaacgctttgacccaacacgcggcgtgcgt
ttggtatcgtttgcaatgcattggattaaagcggaaatgcatgagtacattgtgcgcaat
tggcgcttggtgaaagtggcgacgaccaaagctcaacgcaagttattctttaatttacgt
agcatgaaaactggcgctggtagccttcagcctgatgaggtggcgcatattgcgcgtgag
cttaaagtaaagcctgaagaagtattggagatggaatcgcgccttggtggccatgaaatc
tcactcgagggcaatagtgatgacgacagcgaagacacttttagtccgattgcttattta
gaagatgaacatcctgagccttcagaaatgttatccgcgattgagcaagagcatttgcaa
acaactggcctagcgagcgcccttgcaagccttgatgagcgaagccgtcgaattgttgaa
gcccgctggctcacacaggatagcagtgcaaccttgcatgacttagcggatgagtttggc
gtgtctgctgaacgtattcgccaaattgaacaaaaggcgatggaaaaaatgaaaattgct
ttagctgcgcatgcgcattaa
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