Candidatus Methylopumilus turicensis: BN1209_1369
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Entry
BN1209_1369 CDS
T03844
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN1209_1369 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbac03019
]
BN1209_1369 (pcnB)
Enzymes [BR:
mbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BN1209_1369 (pcnB)
Messenger RNA biogenesis [BR:
mbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN1209_1369 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
CEN56408
UniProt:
A0A0B7J179
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All DBs
Position
1:1365436..1366836
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AA seq
466 aa
AA seq
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MIKKLLQRVFSKKDKSAKHETAKQNGRANKPADTNKNAGHSAKRIASKTHGIDRRLLSNA
AVKTTEGLQKAGFEAYIVGGAVRDLLLKKRPKDFDVATDATPEQVNRVFRRSRIIGRRFR
LVHVMFGDETIEVSTFRGSHLGESDENQVADSGRILRDNVFGNQEEDAVRRDFTANALYY
DPATEDVLDFHNGVPDIQAGILKMIGDPVTRYREDPVRMLRAIRLSAKLGLKIDGATESP
IPKLATLLNDVPPSRLFDEMLKLFLSGHAIESVIQLRKHGLHHGLLPLLDVVLEQPIGAK
FVNLALKNTDARVLAEKPVSPGFFFATLLWHEVLVAWQRYQKQGNRPIPALHMAMTEVSD
IQAEKLAIHKRYSTTMKEIWGLQPRFEMRVGKRPFGLLEHPRYRAAYDFLLLRCESGEVP
MELGEWWTKFAESHADERLTLLKNLPAGNQTESKPRRRRRRKPPSQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaactactgcagcgcgtattttcaaaaaaagacaaatccgccaagcatgaa
actgccaagcaaaatggccgggctaataagcccgccgacaccaataaaaatgcaggtcat
agcgccaaacgtattgcgagtaaaacgcatggaattgaccgtcgtttgctcagcaatgct
gccgtaaaaacaaccgaaggtttgcaaaaagccggcttcgaagcttacattgttggcggt
gcagtaagagacctgctcctcaaaaagcgtcctaaagattttgatgtggcgaccgatgct
acgccagaacaagtgaatcgtgtgttccgccgctcacgcattattggacgccgattccga
ctagtgcatgtgatgtttggtgacgaaaccatcgaggtttcgaccttccgcggcagccat
ttgggcgaaagtgatgagaaccaagtggccgactccggtcgaattctgcgtgataacgtt
tttggcaaccaagaagaggatgccgttcgtcgcgatttcactgccaatgcgctgtattac
gatccagcgaccgaagatgtcctagatttccacaacggtgtccccgatattcaagctgga
atattaaaaatgattggcgaccccgttactcgctatcgtgaagacccagtgcgaatgctc
agagctattcgtctttcggcaaaattaggtttaaaaatagatggggcaacagaatcaccc
attccaaaattagcgacactgttaaatgatgtgcctccgtcacgtctgtttgatgaaatg
ctcaaattattcttgtctggccacgcgattgaaagcgttattcaattgcgcaaacatggc
ttacatcacgggctacttccattactagacgttgtgcttgaacaacctatcggcgcaaag
ttcgtcaatttagcactcaaaaatactgacgcccgcgtgctggctgaaaagcctgtttca
cctggatttttcttcgcaactttactttggcacgaagtgttggtggcatggcaacgctat
caaaagcaagggaatcgtccgattcctgcccttcatatggccatgacagaagtcagcgac
attcaagcagagaagctcgctattcataaacgctacagcaccaccatgaaggaaatttgg
ggcctacaacctcggtttgaaatgcgtgtgggcaaacgtccatttggtctactagagcat
ccacgctatcgggccgcatatgactttttgttattacgttgtgagtcaggcgaagttccg
atggagcttggtgaatggtggacgaagtttgcagaatctcatgcagatgagcgcttaact
ctgctaaaaaaccttcccgcaggcaaccaaactgaatccaagcctcgtcgtcgtcgcaga
agaaaacctccttcacaatga
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