Candidatus Methylopumilus turicensis: BN1209_1377
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Entry
BN1209_1377 CDS
T03844
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_1377 (phrA)
Enzymes [BR:
mbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BN1209_1377 (phrA)
DNA repair and recombination proteins [BR:
mbac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BN1209_1377 (phrA)
Prokaryotic type
BN1209_1377 (phrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CEN56416
UniProt:
A0A0B7IVQ9
LinkDB
All DBs
Position
1:1371124..1372566
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AA seq
480 aa
AA seq
DB search
MQEYNKSLVWFRRDLRDYDHAALYHALKNSAQVFCIFVFDQEILDQLEDKADRRVEFIWE
SLKELKAAFQMQGSDLIVEYGVAKEIVVKKALALGVEAVFSNRDYEPKAVARDANVAEKL
AKHNIAFHQFKDQVLFEQDEVLTQQGKSYGVFTPYKNAHLKKLDDYFVQAYQVDRYAKHL
AKYQADAMSSLDEMGFKTTNLSQMKLPTGMSGALQLFEDFKDRITHYQDARNFPAVKGPS
YLSVHLRFGTISIRHLARTAKSTGGAGAETWLNELIWRDFYFQILYHHPKVADGKAYKAE
FDALPFPNDQAIFQAWCDGATGYPLIDAAMRQLNQTGYMHNRLRMVVASFLVKDLLIDWR
WGERYFAEKLIDFDLSANNGGWQWAASTGCDSQPWFRIFNPITQSEKFDSAGKFIRRYVP
ELANCSDKEIHAPWLIPSLKQEMLNLQIGKTYPHPIVDHATQRNLSLALYKSAGEHAGQS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatacaataaatctttagtgtggtttcgtcgagatttacgtgattatgatcac
gctgcgctttaccatgcacttaaaaactcagcacaagttttttgcatctttgtatttgat
caagagatactagaccagttagaagataaagctgatcgtcgtgttgagtttatctgggaa
agcctcaaagaacttaaagcggcatttcaaatgcaagggagcgacctgattgttgagtat
ggcgttgccaaagagattgtggttaaaaaagcgctagcattaggcgttgaggctgtcttc
agcaatcgtgattacgaaccaaaggcagtagcacgagatgccaatgttgcggaaaaacta
gcaaaacataacattgcgtttcatcaatttaaagaccaggttttatttgaacaagatgaa
gtgctgacgcagcagggcaaatcttacggcgtgtttacgccatacaaaaacgcacatctt
aaaaagctcgatgattactttgtgcaagcttaccaggttgatcgctatgcaaagcattta
gcaaaatatcaagctgatgcaatgtctagcttggacgaaatgggcttcaaaacaaccaat
cttagtcaaatgaaattgccgaccggcatgtctggcgcacttcaactgtttgaagatttc
aaagaccgcatcactcactaccaagatgcgcgaaacttccctgcagttaaaggcccctct
tacctttcggtacatttacgttttggcacgatttcaatccgtcatcttgcaagaaccgca
aaaagtactggcggcgctggtgctgaaacatggctcaatgagctgatttggcgagacttt
tactttcagattttgtatcaccaccctaaagtagccgatggcaaggcttacaaagcggaa
tttgatgcattgccgttccctaatgaccaagcaattttccaagcttggtgcgatggtgca
accggctacccgctgattgatgcggccatgagacaactgaaccaaactggctatatgcac
aatcgattacgtatggtggtcgctagcttcttagtgaaagatttattaatcgactggcgt
tggggcgagcgttatttcgctgagaaactgatcgactttgacctaagtgctaacaatggc
ggatggcagtgggccgcctccacgggctgtgactcacaaccttggtttagaatttttaac
cccattacccaatctgaaaaatttgatagcgccggcaagtttatccgcagatacgtccct
gagttagcgaattgctcagacaaagaaatacatgcgccttggctaataccttctctaaaa
caagaaatgcttaatctgcaaatcggtaaaacttaccctcacccaattgtggatcatgca
acgcagaggaatttgtcactcgctttatacaagagtgccggggaacacgccgggcaaagc
tga
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