Candidatus Methylopumilus turicensis: BN1209_1405
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Entry
BN1209_1405 CDS
T03844
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbac03400
]
BN1209_1405
Enzymes [BR:
mbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BN1209_1405
DNA repair and recombination proteins [BR:
mbac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BN1209_1405
Prokaryotic type
BN1209_1405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CEN56443
UniProt:
A0A0B7J1B9
LinkDB
All DBs
Position
1:complement(1396098..1397702)
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AA seq
534 aa
AA seq
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MLPEVNIVWLKRDLRIQDHAALYEATKQAHDVPQVLVLPVFSWDASVWSSPDYAQQHVAF
VRECLDSLKTELQHIGLDLLESADGIVNFLNALSKTHHIVGLYSHEETGNQCTYALDQEV
AQWCRQHQVPWHEYPQNGVVRRLKNRDHWHAIWEKRMALPQYPVPRVKLVKSDLGLTLLE
ANNKAINFNKPEADKPLRQKGGREPALKILHSFLNGRASRYRGGISSPISSVEAGSRISP
YLAWGVLSIKEVMHTLRMQRVRIKQSPSRYPNNLEAGLKGFESRLHWHCHFMQKLESEPE
IEYRGLHSAFDGVRDEAYADAETSQKLERWKTGKTGWPLVDACMAMLNQTGWINFRMRAM
LMSTASYLYWLHWRETGLHLAREFLDYEPGIHWSQVQMQSGTTGINTLRIYNPIKQARDQ
DPEGAFVKQWLPALKHVPKVWIFEPWLMTPELQQRYGCVIGQDYPAPIISVESAIKAARI
KMSAAKQAASNSSETRQIVQKHASRKFKPSARSKKTKEAKTKGNDTHVYQQALF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgaggtcaatattgtttggttaaagcgtgacttgcgtattcaagatcatgcc
gcactttatgaggcgacaaaacaagcacacgatgtgccccaagtcttggtgttgccagtg
ttcagctgggatgcctctgtatggtccagccctgattacgcgcaacagcatgtcgcattt
gtgcgtgagtgtttggattccctgaaaactgagcttcagcatattggtctagatttgctt
gagtctgcagatggcatagtcaacttcttgaatgccttgtccaaaactcatcatattgtg
ggcttatatagtcatgaggaaacgggcaaccaatgcacttatgcacttgatcaagaggtg
gcacagtggtgtcgtcaacatcaagtgccttggcatgagtatccacagaatggagtggtg
cgtcgcttaaaaaatcgagatcactggcatgctatctgggaaaagcgaatggcactgcct
caatatccagtgccaagggttaagctggttaaaagtgatttaggtttgacattgcttgag
gctaataataaggcgattaattttaataagccagaagcagacaagccactccggcaaaag
ggtggtcgcgaacctgcacttaaaatcttgcattcatttttaaatgggcgcgcgagtcga
taccgtggtggcatttctagtcctatttcttctgtggaagcgggctcccgaatatctccg
tatttggcatggggggtgctcagcatcaaagaagtgatgcacactctccggatgcagcgt
gttcgtatcaagcaatctcccagtaggtaccctaacaacctggaagcgggccttaaaggt
tttgaaagtagactgcattggcattgccattttatgcaaaagctggaatcagagccggaa
attgaatatcgtggcctacacagcgcgttcgatggcgttcgtgatgaagcctatgcagat
gccgaaacaagtcaaaagctagagagatggaagacgggtaaaaccggatggcctttggtg
gatgcgtgcatggccatgctgaaccaaactggttggatcaactttagaatgcgtgccatg
ctaatgagtacggcgagctatttatattggttgcattggcgtgaaaccggattgcatttg
gcaagggagtttttagattacgagccaggcatccactggtcacaagttcagatgcaatct
gggactactgggatcaacactttacggatttataatccaattaaacaggcgagggatcag
gatcctgaaggtgcgtttgtgaagcaatggttgcctgcattaaagcatgtcccaaaggta
tggatatttgaaccatggttaatgacgccagagttacagcaacgctatggttgcgtgatc
ggtcaagattatccagcgccaatcatttcggtcgagtcagccatcaaggccgccagaatt
aaaatgtcggctgccaagcaagcggccagtaatagttcagaaactaggcaaattgttcaa
aagcatgcttcgcgaaaattcaaaccttcagcaaggtctaaaaaaaccaaagaagcaaag
acaaaaggcaacgatactcatgtttaccaacaagcccttttttag
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