Candidatus Methylopumilus turicensis: BN1209_1408
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Entry
BN1209_1408 CDS
T03844
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbac03016
]
BN1209_1408
Enzymes [BR:
mbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BN1209_1408
Transfer RNA biogenesis [BR:
mbac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BN1209_1408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CEN56446
UniProt:
A0A0B7IVT4
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All DBs
Position
1:1401645..1403129
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AA seq
494 aa
AA seq
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MTFKHNHHHYSKKDIARIATEAMIERGLEPEFPDAVLKQLERIDQAADDDHDPTIFDLTD
LLWCSLDNDDSEDLDQLTACQVLKNGLVKIFVAIADVDALVKKGSPIDDHAHINSASIYT
SARIFPMLPEKLSTNLTSLNQDVDRLAVVTEMVINHDGSISESHIYRAKVRNHAKLAYDA
VSDWIEHKAPAPEALSSVKGMNEQLLFQDKTAQILRKRRHEQGSLDLEIFQPKAIFDGEK
VIGIAQQVQNRGRQLIEEFMIATNECTAKFLAAQGNASLRRVVRSPENWLRIVALAKKYD
EQLPSQPDSKALSVFLAKRHQADPLRFPDLSLVIVKLMGSGEYIVEQPNAEPIGHFGLAV
QDYTHSTAPNRRYPDLITLRMLKAALQNTPPPYSNQDLKLLAEHCSQQEDAARKVERRVR
KSEAALLLSSRINQTFDAIVTGSSASATWVRILEMPIEGLLADGEPNLDVGRRIRVRLVS
VNVEKGFIDFIQNY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacctttaaacacaatcatcatcactattctaaaaaagacattgcacgcattgccacc
gaggcaatgattgagcggggccttgaacccgagtttccagatgcagtgctcaaacaatta
gaaagaattgatcaagcggctgatgacgaccatgacccaactatttttgatctgacagac
cttctttggtgctcactcgataacgatgactcagaagaccttgatcaactaactgcatgc
caagtattaaaaaatggtctagtcaaaatatttgttgccattgcggatgtcgatgcgctt
gttaaaaaaggctcgcctattgatgatcatgcccacatcaatagcgcatctatttatacg
tccgccagaatattccccatgttgccagagaaactatcgaccaatctgacttcattaaat
caagatgttgatcggcttgctgtggtaacagaaatggtgattaatcatgatggttcgatt
agcgaatcccatatttatcgagcaaaagtacgtaatcatgcaaagcttgcttacgacgca
gtatctgactggattgaacataaggcgccagcaccggaggctctctcaagcgtgaagggc
atgaatgagcagctgctatttcaagacaagacagcgcaaatactcaggaagcggcgccat
gagcaaggctcactggatctcgaaatttttcagccaaaagcaatttttgacggcgaaaaa
gtgatcgggatagcacagcaagtacaaaatcgcggccggcagcttattgaagagttcatg
atagccaccaatgaatgcacagcgaaattcttggcggcacaaggcaacgcttctctcaga
agagtggtgcgctctccagaaaactggttacgaattgttgcgcttgcaaaaaaatatgat
gagcaactgccaagtcaaccagactcaaaagccctctcagtttttttggctaaaagacat
caagcagatcccctaagatttcctgacttgtcattagtgatcgtcaaattgatggggtca
ggtgagtacattgttgagcaacctaacgcagaaccaatcggtcactttggactggctgtc
caagattacacacattccaccgccccgaatcgaagatatcccgacttaatcacgttaaga
atgttaaaagccgcattacaaaacacgccgccaccttatagcaaccaagatttaaaattg
ctggcggaacattgctctcaacaagaggatgccgctagaaaagtagaaagaagagtgcgg
aagtcggaagccgcgcttttactttcatcgcgaatcaatcaaacttttgatgccatcgtt
acaggcagctcagcaagtgcaacctgggttcgtatcttagagatgcctatcgaaggattg
cttgcagatggcgagccgaacttagatgttggtagaagaattagagtcaggcttgtctct
gtgaatgttgagaaaggttttatagacttcatacaaaactattaa
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