Candidatus Methylopumilus turicensis: BN1209_1725
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Entry
BN1209_1725 CDS
T03844
Symbol
mrdA
Name
(GenBank) transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac00550
Peptidoglycan biosynthesis
mbac01100
Metabolic pathways
mbac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1209_1725 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BN1209_1725 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mbac01011
]
BN1209_1725 (mrdA)
Enzymes [BR:
mbac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BN1209_1725 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mbac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BN1209_1725 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MmoB_DmpM
DUF2633
Motif
Other DBs
NCBI-ProteinID:
CEN56762
UniProt:
A0A0B7IWT1
LinkDB
All DBs
Position
1:complement(1691924..1693846)
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AA seq
640 aa
AA seq
DB search
MRLRFEVKNHSLEQHHYSARLTVAMVLILLCFAILLGRFAYLQILKYDYFHTLAENNRVS
LVPIVPNRGLILDRNGVTLAHNFFVYTLEITPSKAVDVEATINHISQLIEVSAEDRKRFK
KLRQESHSFESVPIRTHLNEVEAAKFAAHRYQFPGVEIRSRLFRHYPLGNLGVHMIGYIG
RINAADVKVLEQSEDLSNYKGSDHIGKGGIEQYYERQLHGTTGFQQVEIDADGHAIRVLS
STPPVPGDNLVLSIDSKMQDIAEKAFENHRGALVAINPKNGEILSYVSMPTFDPNLFVDG
IDADTWKSLNQSLDRPLINRPIRGIYPPGSTFKPFVAMAGLQEAKRKPPFSIGDPGFYTL
AGSSHQYRDWKPGGHGQVDMQKAITVSCDTFFYGLALELGIDKLTSFVSHFGFGKKTGVD
LAGEIGGLLPTPEWKWRRWKQKWYPGETVIVGIGQGYTLVTPMQLAQATAALANNGIAMK
PHLVSSIQKHNGAETHLMPITKLDEIALDTGNIEIVRAGMTAVTQPGGTAASVGAGSSYS
IAAKTGTAQVVGIKQGAKYNAGSMDERHRDHALFIAYAPADDPKIAVAVIVENGGHGGSA
AGPIARKVMDYYLLGKTPVTPPQDASKKPEASIVEDAPHD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgcgtttcgaagtaaaaaatcattctttagagcaacatcattacagcgcgcgc
ttgaccgtggcaatggtcttgatattgctgtgctttgctattttgttaggccgcttcgct
tatttgcagattttgaagtacgactattttcacacgcttgcagaaaacaatcgtgtttca
ttggttccaatcgtgcctaatcggggcctgattcttgatcgaaatggtgtgaccttagcg
cataatttctttgtttacaccttggaaattaccccatcaaaagcggtcgatgttgaagca
accattaatcatattagccagttaattgaagtgagtgctgaagaccgaaagcgttttaaa
aagttacgtcaagaaagtcacagttttgagagtgtccctattagaacccatctaaacgaa
gtagaagccgctaaatttgctgcgcatcgctatcagtttcctggtgtagaaattcgctca
cgactttttaggcattaccctctaggcaatcttggtgtgcatatgattggctatattggg
cgtattaatgcggcggatgttaaagtcctcgagcagtctgaagacctctctaattacaaa
ggctctgaccacataggcaagggtggtattgagcaatattacgaacgtcaattgcatggc
accacaggttttcagcaagtggaaattgatgctgatggccatgcgattcgggtgttatca
agcacaccaccagtgccaggtgataacttagtgttgtcgatcgactctaagatgcaagat
atcgccgaaaaagcgtttgaaaaccatcgtggcgcattagtggcaattaatccaaaaaat
ggtgaaattttatcttatgtgagtatgccaacctttgacccaaatctctttgtggatggc
attgatgcggatacctggaaatcgctcaatcaatccttggatcgtcccctcatcaaccgt
cctattcggggtatctatccaccagggtcaacatttaagccttttgttgcaatggccggc
ttacaagaagcgaagcgcaagccgcctttcagtataggtgaccctgggttttatacatta
gcaggtagctcgcatcagtatcgtgattggaaaccaggtggccatggtcaagtggatatg
caaaaggcgattactgtttcttgcgatacatttttttatggactcgcgttagagctgggt
attgataaactcacttctttcgtcagtcacttcggctttgggaaaaaaacaggtgtagat
ttggcgggtgagattggtggtttgttaccaacgcctgaatggaaatggcgtcgttggaaa
caaaaatggtatccaggtgaaacggtgattgtcggaattggccaaggctataccttggtc
acgccaatgcagctcgcgcaggcaacagcggcgctggcgaataatggcattgcaatgaag
ccgcatttggtgagcagcattcaaaagcataatggggcagaaacgcatttaatgcccatc
acaaagttggatgagatcgcgcttgatacgggtaacattgaaattgtaagagcgggcatg
acggcggtgactcagcctggtgggactgccgcgagcgtgggggcaggcagcagctatagt
atcgcggcaaaaacaggaaccgctcaggtcgtgggtatcaagcagggcgcgaaatataat
gcgggaagtatggatgagcgtcatcgcgaccatgctttatttattgcttacgcccctgct
gatgacccaaaaattgctgtggcagtgattgttgaaaacggcggtcatggtggttcagca
gcgggccctattgcccgtaaagtcatggattattatctcctaggaaaaacgcccgtcaca
ccaccacaggacgccagcaaaaagcctgaagcgtctattgtcgaggatgctccacatgat
tag
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