Aquirhabdus parva: HYN46_01215
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Entry
HYN46_01215 CDS
T05575
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN46_01215 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbah03019
]
HYN46_01215 (pnp)
03016 Transfer RNA biogenesis [BR:
mbah03016
]
HYN46_01215 (pnp)
Enzymes [BR:
mbah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HYN46_01215 (pnp)
Messenger RNA biogenesis [BR:
mbah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYN46_01215 (pnp)
Transfer RNA biogenesis [BR:
mbah03016
]
Prokaryotic type
tRNA degradation factors
HYN46_01215 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH_N4BP1_2nd
KH-I_KHDC4-BBP
KH_KhpA-B
OB_RRP5_4th
S1_2
DUF3016
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AXI01634
UniProt:
A0A345P2X5
LinkDB
All DBs
Position
255476..257569
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AA seq
697 aa
AA seq
DB search
MSMFNIVRKEVQFGRHQLVLETGRIARQAHSVLVTLGGVTVLVAVVAAKKAKPGQDFFAL
TVNYQEKQYAAGRIPGGYGKREGRASESETLISRLIDRPIRPLFPEGYFNEVQVTATVVS
SDKTMEADIAAMIGTSAAMSIAGVPFNGPIAGARVAFIDGDYILNPSTEELSRSDLDLVV
AGTDKAVLMVESEAKELSEDQMLGAVLFGHDEMQVVIEAIKQFAAEVGNPVSTWTPAVQN
DELKARLATRFAEEISVAYTETEKALRYEKLDAIKQAALAEFAPEGSDVDPAELQNYFED
LKYRTVRDNILSGKPRIDGRDTKTVRALDIQVGVLPRAHGSSLFTRGETQALVTATLGNT
RDALMVDSLAGTRNDPFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVYPVLPAAD
RFPYVIRVVSDITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGDRFAVLS
DILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMELALSQAYQGRIHILNGMNQ
VLARSRTEINMHAPTYAVIQVNPDKIRDIIGKGGATIRALTEETKATIDIEDNGTVRVFG
ESKAATQAAIAKIQAITAEIEPGTIYEGTVVRIVEFGAFVNLLPGTDGLLHISQISNERI
ANVADVLQEGQKIRVQVQDVDQRGRIKLSMKDLAAVV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtttaatatcgtccgcaaagaagttcaatttggacgtcatcagttagtgctt
gaaaccggtcgtattgctcgtcaagcgcactctgtattggtcactctgggtggtgttacg
gttcttgttgcggttgtagcggcgaaaaaagcaaaaccaggtcaagacttctttgcactg
actgtgaattatcaagaaaaacaatatgcagcgggtcgtattccgggtggttatggcaag
cgtgaaggccgtgccagtgaaagtgaaacgctgatcagccgtttgatcgatcgtccaatt
cgcccgttgttccctgaaggttacttcaacgaagtacaagtgactgccaccgtcgtctct
tctgataaaaccatggaagctgatattgctgccatgattggtaccagtgctgcgatgtct
attgcaggcgtgccgttcaatggcccaatcgcgggtgctcgtgtcgcattcatcgatggt
gattacatcttgaatccatcgactgaagaacttagccgcagtgatttggatctggttgtt
gctggaacggacaaagcggtactgatggttgaatcagaagcgaaagagttatcagaagat
caaatgctcggtgcagtcttgtttggtcatgacgaaatgcaagtcgtgattgaagcgatc
aaacaattcgctgctgaggtggggaatcctgtaagcacgtggacaccagcagttcaaaac
gacgaattaaaagcacgtttagcgacccgctttgctgaagaaatcagcgttgcgtatact
gaaactgaaaaagcgctgcgttatgaaaaattagatgcaattaaacaagcggctttggct
gagtttgcaccggaaggcagcgatgttgatccagcagaattgcaaaattactttgaagat
ctgaaatatcgcaccgttcgtgacaatatcttgtccggcaagcctcgtattgatggtcgt
gataccaagactgtacgtgcgctggatatacaagttggcgtgcttcctcgtgcgcatggt
tcatccctgtttacccgtggtgaaacacaggctctggtcacagcaacattgggtaatacc
cgtgatgcgctgatggttgactctttggcaggtacacgcaacgatccattcatgctgcac
tacaatttccctgcatactctgtaggtgaaactggccgtgaatcaggtccaaaacgtcgt
gaaattggtcatggccgtttggcacgtcgtggtgtataccctgtattaccagcagcagac
cgtttcccgtacgtgattcgtgtggtatcggatattactgaatccaacggttcttcatca
atggcttcagtttgtggtgctagcttggcgttgatggatgcgggtgtgccgctaaaagca
ccggttgcgggtatcgcgatgggcttggtaaaagaaggtgatcgtttcgcggttctctct
gacatcctgggtgatgaagatcacttgggtgatatggactttaaagtggcgggttctgca
aatggcatcaccgcactgcaaatggacatcaagatcgaagggattaccgaagaaatcatg
gagttggcactcagccaagcgtaccaaggtcgtattcatatcctcaatggcatgaaccaa
gtgctggcacgtagccgtactgaaatcaacatgcatgcgcctacctatgccgtgattcaa
gttaacccggacaagattcgtgacattattggtaaaggcggcgcaacgatccgtgccttg
accgaagaaaccaaagccacgattgatatcgaagacaatggtacggttcgtgtatttggc
gaaagcaaagcggcaactcaagcggccattgcgaagatccaagcgattactgctgaaatc
gaacctggtaccatttacgaaggcactgttgtgcgtatcgttgagtttggtgcatttgtg
aacttgctgccaggcacagatggcctgctgcatatttcacaaatttcaaacgagcgtatt
gcaaacgttgctgatgttttgcaagaaggtcaaaagatccgtgttcaagtgcaggacgtt
gatcaacgcggtcgtatcaagctgtcgatgaaagatcttgctgcagttgtttga
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