Aquirhabdus parva: HYN46_03465
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Entry
HYN46_03465 CDS
T05575
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbah
Aquirhabdus parva
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbah03032
]
HYN46_03465 (topA)
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_03465 (topA)
Enzymes [BR:
mbah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYN46_03465 (topA)
DNA replication proteins [BR:
mbah03032
]
Prokaryotic type
DNA Topoisomerases
HYN46_03465 (topA)
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN46_03465 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_C_rpt
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXI02004
UniProt:
A0A345P3Z5
LinkDB
All DBs
Position
776189..778978
Genome browser
AA seq
929 aa
AA seq
DB search
MATRPRSTTTNTIKAGRRTSPKAATAKTSAAKRVKSDEDIADLPEKRTTKARALVIVESP
AKAKTINKYLGSDYIVKSSIGHVRDLPVSGGGVKAPVVKLDAKAKAKLTDEQKALEKETK
SRAALINRMGVDPEHDWQAHYEVLPGKEHVVSELQKIAGQVDEIYLATDLDREGEAIAWH
LQQVIGGNPDKYKRVVFNEITKNAIQAAFKEPGRLDLDKVNAQQARRFLDRVVGYMVSPL
LWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIFADTLYSEKGKVPIRLEAIK
QAGAPLKLKNKAETDAVVAKITPATYTVIAREDKPTKVNPTAPYITSTLQQAASTRLGFS
VKKTMILAQRLYEAGHITYMRTDSTFISNDALAMVRGHIEDAFGAKYVPAKPNFYGNKAG
AQEAHEAIRPSNIKLSGDQLTTVERDAQRLYELIWRQFTASQMPPAEYLSSNITVKAADV
ELRARGRTMVFDGFTKVMAPSKQDDDLLLPTVKSGDVLELVKVDPSQHFTKPPARFTEAS
LVKELEKRGIGRPSTYAAIISTVQDRGYVKLDNRRLYAEKMGDIVTDRLSENFSNLMDYK
FTAELEGQLDKVADGDRDWKNVLNEFYGDFKQKLVRAQSQDPDQGMRRNLPVAVDEVSCP
LCSRPMQIRTGSTGVFLGCSGYNLPPKERCKGTINLAPVESLAALTEDTSSDSEDGSAAE
TADLMAKKRCPICDTAMDSYIIDGGRKLHVCGNNPDCSGHIVEEGSFKIKGYDGPTIPCD
KCDGEMQLKTGRFGPYFACNSCTNTRKVLKNGQPAPPRADAIPMPELRSTKHDDYFILRD
GAAGMFLAASKFPKIRETRAPTIGELRSVKDKLDPKHLYLLGAPDTDPDGNPALLKFSRK
TASQYVSSEHDGKPTKWSMIYENGEWVEG
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgtccacgctcgactactaccaacacgattaaagcgggtcggcgtactagc
cctaaagcggctacagcaaagacctcggcagcaaaacgtgtcaagagtgacgaagatatt
gcggacttacctgagaaaagaacgacgaaagcccgtgcattagtgatcgtcgagtctcca
gctaaagcaaaaacgattaataaatatctgggcagtgactatatcgtcaagtccagtatt
ggtcatgttcgtgatttgcccgtgagtggaggcggtgtcaaagcacctgtggtgaaatta
gatgcaaaagccaaggcgaagcttacggatgagcagaaagcgttagagaaagaaactaaa
tcacgtgctgcattgatcaatcgaatgggggtagaccctgagcatgattggcaagcgcat
tatgaagtcttgccgggtaaagagcatgtggtcagtgagctgcagaagattgcaggtcaa
gttgatgaaatctatctcgcaaccgacttggacagagaaggagaggcgattgcttggcat
ttgcagcaagtgattggcggtaatcctgataagtataagcgcgtggtattcaatgaaatt
accaaaaatgccattcaggcggcgtttaaagagcctggccgcttagatttagataaagtg
aatgcacaacaggcacgtcgttttcttgatcgtgttgtgggttacatggtttcaccactc
ttgtgggaaaaaattgctcgaggattatcggctggacgtgttcagtctgtagcggtgaaa
ctcgtggtcgagcgtgagcgcgagatccgtgcttttattcctgaagaatactgggaaatc
tttgcagatacgctgtacagcgagaaggggaaagttccgatccgcttggaggcgattaag
caagctggtgcaccccttaaattaaaaaacaaagctgaaacggatgcggtggttgccaaa
ataacgccagcaacctataccgtgattgcacgtgaagataagccgacgaaggtgaatcca
acagcaccttatatcacgtcgactttgcaacaagccgcaagtacgcgtctgggattttcg
gtcaagaaaaccatgatcttggcgcaacgtctttatgaggcggggcatattacctatatg
cgtacggattcgacatttatcagtaatgatgcattggcaatggtccgtggtcatattgaa
gatgcatttggcgcgaaatatgtgccagcgaaacccaatttttatggcaataaagccggt
gcacaagaagcgcacgaggcaattcgcccatctaatattaaattgtctggtgaccagctc
acgacggtcgagcgtgatgcacagcgtctgtatgagctgatttggcgccaatttacggcg
agtcaaatgccgccagctgaatatctttcgtcgaatatcacggtgaaagccgctgacgtt
gaactgcgtgcccgtggccgcactatggtctttgatggtttcactaaagtcatggctccg
agcaaacaagatgatgatttgttgctgccgacagtaaaatctggggatgtcttagaactg
gtcaaagttgatccgagtcagcactttactaaaccacctgcgcgctttactgaagccagt
ttggtcaaagagcttgagaaacggggcattggtcgtccttcgacctatgcggcgattatt
tctaccgtacaagaccgcggttatgtgaaattggataatcggcgtctgtatgcggaaaaa
atgggtgatatcgttaccgaccggttaagtgaaaatttttctaatctaatggattataaa
ttcactgccgagcttgaaggtcagcttgataaagttgccgatggagatcgtgattggaaa
aatgtacttaatgagttttatggtgactttaaacaaaaactagttcgtgcacagtcgcaa
gatccagatcaaggcatgcgtcgtaatttaccggttgcggttgatgaagtgtcctgtcca
ctatgtagtcgccccatgcagattcgtacggggtctacaggtgtgtttttaggctgttct
ggctataacctaccaccgaaagagcgttgtaaaggtacgatcaatctggcacctgttgag
tcactggctgcgcttaccgaagacaccagtagtgatagtgaagatggcagtgcagcagaa
actgcggatctaatggccaagaaacgctgtccgatttgtgacactgcgatggatagttat
attatcgacggcggtcgtaagctacatgtgtgcggtaataacccggattgctcggggcat
atcgttgaagagggatcatttaaaatcaaaggctatgatggcccaacgattccttgcgat
aagtgtgatggcgagatgcaattgaaaacgggtcgctttggcccttactttgcctgtaac
agctgtacgaacacccgtaaagtgctcaaaaatggtcaacctgcaccaccgcgtgcggat
gcgatcccaatgcctgaattacgctcgaccaaacatgatgattatttcattctgcgcgat
ggtgctgctgggatgttcttagcggccagcaagttcccaaaaatccgtgaaacacgtgcg
ccaaccattggtgagttacgctcggttaaagataagcttgatcctaagcatctttattta
ttgggtgcgccagataccgatcctgatggtaatccggctttgcttaagtttagtcgtaaa
acagccagtcagtatgtgtcttctgagcatgacggaaaacccaccaaatggtcgatgatt
tatgaaaatggtgagtgggtagaaggctag
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