Aquirhabdus parva: HYN46_06500
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Entry
HYN46_06500 CDS
T05575
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03030
DNA replication
mbah03430
Mismatch repair
mbah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN46_06500
03430 Mismatch repair
HYN46_06500
03440 Homologous recombination
HYN46_06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbah03032
]
HYN46_06500
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_06500
Enzymes [BR:
mbah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN46_06500
DNA replication proteins [BR:
mbah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN46_06500
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN46_06500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXI02507
UniProt:
A0A345P5E8
LinkDB
All DBs
Position
complement(1446098..1449619)
Genome browser
AA seq
1173 aa
AA seq
DB search
MTFIHLGVHSEFSITDSIARVGDLVKQAAAFNMPALALTDLSNLYAAVKFYTGCRNKGIK
PILGSELRLEDAQGRVTLLAMNQVGWRHLTEIVSQGFIEGLSLGLPLIKTDWIFHKNNGL
IAILGQYSDVGQALRSATPERAETLIEAWREHFGDRVYLAITRTDRPGEAAYVDAVLELA
ERLQIPVVAHNDVRFLHTDDFDAHEARVCISSGHVLADERRPREYSSEQYFKNTEQMVAL
FADVPEAIANTIEIAKRCTVTIELGKNYLPDFPVPEGYDIARFFAETSQEGLNIRLGELY
PESERDENWLERRKVYDDRLNFEIKTINDMGFPGYFLIVMDFIRWSKNNGVPVGPGRGSG
AGSLVAYSLGITDLDPLKYDLLFERFLNPERVSMPDFDIDFCIAGRDRVIEYVAQAYGRE
AVSQIITFGTMAAKGAVRDVTRVLGKAFGLGNRISALIPSKPPGITLSEALEVEPQLKDL
VTNPTGNDYDDVTEIWEMATKLEGITRNVGKHAGGVLIAPSKISDFSAVYCDEEGSRVSQ
FDKDDVEKVGLVKFDFLGLRNLTVIDQAVEAINLRNQQNNEPILDLKHIALDDKKAFKIL
QDAKTTAVFQLESSGMKRMLKEAKPSKFEEIIAFVALYRPGPMDLIPDFIYRMHGGQFEY
LHPLLTDVLKPTYGVMVYQEQVMQAAQVCAGYSLGGADLLRRAMGKKKPEEMVKQRVTFV
EGAATKGIDEAKANEIFDYIEKFAGYGFNKSHAAAYALLSYHTAWLKAHYPAEFMAAVLT
SEMQNTDTIVFMISDCRELGLKILPPSVNWSDYRFRASDSGTIIYGLGAIKGVGEAAMES
VMQARKEGGEFKDIFDFCQRIDLKKANKRTLEALIRSGALDCLCPSNKIENSKGEYRAVL
ADQLEEAVQAAEQNRQNLDSGIFDLFGEIEVPARKAPPKSIIWSDEVRLKGEKDTLGLYL
TGHPIDVYNPELKNFIKCKLADIEATKRGVTTIFAGLVIDVANFPNRVVITLDDGTARID
VNCQHENFMRYKEILKPETIVVIEGEISEREGYDRPIGRLRKVFTMNDIRSRRAEAIVLD
LVSKGLNQDLVQQLQKTLPLFNQENTEQRRIPIHFQIDHTYAKATLSVGERWYVRPEDEL
LKHLREHFGKHAVSIVYQRKTHATENTITAHSN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgacttttattcatcttggtgtgcatagcgaattctcgataacggactcgattgcacgc
gttggcgacttggtcaaacaagctgcagcctttaatatgcctgcgcttgcacttacagat
ttatccaatttatatgctgctgtaaagttttatacaggctgtcgcaacaaaggcattaaa
cccattttaggcagtgaattacgccttgaagacgcacaaggccgtgtaacactattggcc
atgaatcaagtgggctggcgccacttgaccgaaattgtttctcaaggatttattgagggc
ctaagtctaggtctaccgctgatcaaaacagattggatttttcataaaaataacggattg
attgctatattgggacaatatagtgatgtcggccaggctcttagaagtgcaacaccagag
cgtgcagaaactcttattgaagcatggcgtgaacattttggcgatcgcgtttatcttgca
atcacccgcacggaccgcccaggtgaagccgcttatgttgacgcggtgcttgagttagca
gaacgtttacagattccagtggttgcccataatgatgttcgtttcttgcatacagatgat
tttgatgcccatgaagcccgagtttgtatttcaagtggtcacgttctagccgatgagcgc
cgcccgcgcgaatactccagtgagcagtattttaaaaataccgagcaaatggtcgcatta
tttgcggatgtacccgaagctatcgcaaatacgattgaaattgcgaaacgctgtacggtg
actattgagctcggtaaaaactatttacctgacttccctgttcctgaaggctatgacatt
gcaaggttctttgcagaaacctctcaagaggggctcaatattcgactaggtgagctctac
ccagagtccgaacgcgatgaaaactggctcgagcgtcgcaaagtctatgatgatcgttta
aatttcgagatcaagaccattaacgatatgggcttccccggttatttcttgatcgttatg
gactttattcgatggtctaaaaataacggcgtcccagtaggaccaggtcgtggatcgggt
gcagggtctctggtcgcatatagtctgggtattactgatcttgatccgctgaaatatgat
cttctcttcgaacgcttcttaaatcctgagcgggtatccatgcccgactttgatattgac
ttttgtattgccggtcgggaccgtgtgatcgagtatgttgcccaagcatacggtcgtgaa
gcagtatctcagatcattacgtttggaactatggccgctaaaggcgcagtacgagatgtc
actcgagtactgggtaaagcctttggactaggtaatcgtatttcagcgctaattccttcc
aaaccaccaggcataacactttctgaagcgctagaagttgagcctcaactcaaagactta
gtcaccaatccaacaggtaatgactatgatgatgtgactgaaatctgggaaatggcaacc
aagctggaaggcattacacgtaatgtcggtaagcatgccggtggcgtgctcattgcaccg
agcaaaatcagcgacttctccgcagtctattgtgatgaagaaggctcacgggtcagtcag
tttgataaagatgacgttgaaaaagtagggcttgttaagttcgactttttgggactgcgg
aatttaacggtgattgaccaggccgttgaagcgatcaacttacgcaatcaacaaaacaat
gagccgatactcgatctcaaacatatcgcgcttgatgataaaaaagcctttaaaattctt
caggatgcaaaaacaaccgcagtattccagcttgaaagtagtggcatgaaacggatgctc
aaagaagcaaaacccagtaaatttgaagaaattattgcatttgttgcactttatcgtcca
ggtcccatggacctgattccagactttatctaccgtatgcatggtggacaattcgaatat
ctgcacccgctcctcaccgatgtcctcaagcctacttatggcgtgatggtctaccaagag
caggttatgcaagccgcgcaggtttgcgcgggttactctttgggtggtgcagatttgctg
cgccgagcaatgggtaagaagaaacccgaagaaatggtgaagcaacgtgtcacctttgtc
gaaggcgctgcaaccaaagggattgatgaagcaaaagcaaacgaaatatttgactatatt
gagaagtttgcgggctatggctttaataaatctcacgccgccgcctatgcactcctctcc
tatcatactgcatggctgaaagcacactatccagccgagtttatggctgcggttctcaca
tctgaaatgcaaaataccgatacgatcgttttcatgatcagcgattgtcgcgagctcgga
ttaaagatcctgcctccttcggtaaactggtctgattaccgtttcagagcatcggactca
ggcacgatcatttatggtttgggcgcgattaagggtgttggtgaggctgcgatggaatca
gtcatgcaagcgcgaaaagaaggtggcgaatttaaagatattttcgacttttgccaacgt
attgacctcaaaaaagccaataagcgtacactcgaggcattgattcgatcaggcgcatta
gattgcttatgcccatccaataaaatcgaaaatagtaaaggtgaatatcgtgcggtgctt
gctgatcaactagaagaggcagtgcaagcagcagaacaaaatcgtcaaaatctcgatagc
ggcatttttgatttgtttggtgaaattgaagttcctgcgcgtaaagctccaccgaaatca
atcatatggtctgatgaggttcgcttaaaaggtgagaaagataccttaggtctttatctc
acgggacatcccatcgacgtctataatcctgaacttaaaaatttcattaaatgtaaactt
gcagacattgaagcaactaagcgcggcgtaacaacgatatttgcaggattggttattgat
gttgcaaattttccaaaccgagttgtcattactttagatgatggtacggcacgtattgat
gttaattgtcagcatgaaaatttcatgcgttataaagaaatattaaaacctgaaacgatt
gttgttattgagggagaaatcagtgaacgggagggatatgatcgcccaatcggacgcttg
cgcaaagtctttacaatgaacgatatccgctcaagacgtgcagaggccattgtattagat
ctcgtttcaaaaggcttgaatcaagacctcgtacaacaattacagaaaacattgccgctt
ttcaatcaagaaaacactgaacaaagacgaattcccattcattttcagattgatcatacc
tatgcgaaagccaccctcagtgtaggtgaacgctggtacgtacgaccagaagatgagtta
ctgaagcatctccgtgagcacttcggtaagcatgccgtcagtattgtttatcaacgtaaa
acacatgcgactgagaatacaatcactgcacattcaaattaa
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