Aquirhabdus parva: HYN46_06860
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Entry
HYN46_06860 CDS
T05575
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN46_06860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbah03019
]
HYN46_06860
Enzymes [BR:
mbah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HYN46_06860
Messenger RNA biogenesis [BR:
mbah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN46_06860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Glyoxalase
Dark_CARD
Cas3-like_C_2
ERCC3_RAD25_C
FACT-Spt16_Nlob
Motif
Other DBs
NCBI-ProteinID:
AXI02570
UniProt:
A0A345P5L1
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All DBs
Position
1530260..1531408
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AA seq
382 aa
AA seq
DB search
MSSSFDSVALHPELQQGIADLGFTQMTPIQQQVLRFTLAGHDAIGRAQTGTGKTAAFLIS
IINDLLENPVADERFRGEPRALILAPTRELALQIESDAIALLKHTKLSVVTLLGGVDYDK
QRKALDKRFVDIIVATPGRLIDFLEQKEIWLDRLEFLVIDEADRLLDMGFIPSVKRIVRL
APPKADRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEQKTSDRVKQRVFIVGRRDKER
LLKELLESETIDKVMVFANRRDQVRKLFDRLKAQGYKVGMLSGEIPQDKRIKMLDQFKSG
KTQIMIATDVAGRGIHVDGVSHVINYTLPEQADDYVHRIGRTGRAGALGVSISFACEDDS
FLLADLEKAIGQKLPLERPEGY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagtttcgactcagtcgcgttacaccctgaattacagcagggaattgctgat
cttggttttacccagatgacaccgatacagcaacaagttttacgttttactctggcagga
catgatgccattggtcgtgcacagactggtacaggtaaaactgctgcatttttaattagt
attattaatgatttattagaaaatcctgttgcagatgaacgatttcgtggtgagccgcgt
gcactcattttagcaccaacgcgcgagcttgcattgcagatcgaaagtgacgcaattgca
ctgctcaagcataccaaactcagtgttgttacccttcttggcggggttgattatgataaa
caacgtaaagcacttgataagcgattcgtcgatattatcgtagccacgccgggccgtttg
attgattttttagaacaaaaagaaatatggcttgaccgccttgagtttttagtgattgat
gaagcagatcgtttgttggatatgggattcattccctcagtaaaacgcattgttcgtttg
gctccgcccaaagcagatcgtcaaacgctaatgttctctgcgacttttagttatgacgtt
ctgaacttagctcagcaatggctgtttgagcctgtcacagtagaaattgaacctgaacaa
aaaacaagtgatcgcgttaagcagcgtgtatttatagtcggtcgtcgtgacaaagagcga
ctgcttaaagaattacttgagtctgagactatagataaagtgatggtttttgcaaatcgt
cgcgatcaggtgcgtaagctgtttgatcgattaaaggcgcaaggttataaagttggcatg
ctctcaggcgaaattccgcaagataaacgtattaaaatgctggatcaatttaagtctggt
aaaacacagattatgatcgctacggatgtcgcagggcggggtattcatgttgatggtgtt
agccatgtaattaactataccttgccagagcaggctgatgattacgtgcaccgcattggt
cggactgggcgtgccggagccttaggggttagtattagttttgcttgtgaagacgattct
tttttattagcagatcttgagaaagccattgggcaaaagctgccattagagcgccctgaa
ggttactaa
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