Aquirhabdus parva: HYN46_07700
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Entry
HYN46_07700 CDS
T05575
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03030
DNA replication
mbah03430
Mismatch repair
mbah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN46_07700
03430 Mismatch repair
HYN46_07700
03440 Homologous recombination
HYN46_07700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbah03032
]
HYN46_07700
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_07700
Enzymes [BR:
mbah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN46_07700
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
HYN46_07700
DNA replication proteins [BR:
mbah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN46_07700
RNase H
HYN46_07700
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN46_07700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AXI02728
UniProt:
A0A345P619
LinkDB
All DBs
Position
1737733..1739244
Genome browser
AA seq
503 aa
AA seq
DB search
MSLLTTSSQMITLYVDGACRGNPGKGGWGVYVEYADGKKAEFCGGEPHTTNNRMELMAAI
EGLARTDPTLAATVWTDSNYVQKGISEWIHNWKKKNWKKSDGGAVINADLWKILDKLSQN
RKIDWRWIKGHAGHAGNEKADQLANQGLETQGPSIALANDKKQTLAAHMDSPEDKPLIIK
AKNTESTSLMDLLLPPDEFDDYQEPNWLNEEDQDLSESYERFDEAEETLATQGSLTPTLP
DDAYTEESQGIVRTHNTARLDAFTSSGKRQLILDTETTGFDPKTGDRIVEIGVIELINRK
LTGNSLHVYLNPQRLVGESENIHGLSDAFLSDKPLFADIADELEAFLVGAEVIAHNASFD
MRFLEAEMEMAGRRPLSEQITVTDTLAIAKRKHPGQKNSLDALAKRYEIKERDRTFHGAL
LDAEILADVYLLLTGGQVTLDMDTQEERSNQINESRPRIQRKLAVVKAHTDELNLHQAWI
AEMDSGRDGAISIWHKWEQSQTS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctactcacaacctcatcccaaatgattacgctttatgtcgatggcgcatgtcgg
ggtaatcctggtaaaggcggttggggtgtttatgtggagtatgcggatggcaaaaaagca
gagttttgtggcggagaaccacataccaccaataatcgcatggagcttatggctgcaata
gaaggattagcgcgtacagaccctacgcttgcggcaacggtatggacagactcgaattat
gttcaaaaagggattagcgagtggatccataattggaagaaaaaaaactggaagaagagt
gatggcggtgccgtcatcaatgcagatttatggaaaattctcgacaagctcagccaaaat
cgaaaaatagactggcgctggattaaaggtcatgcgggacatgctggcaatgaaaaagca
gatcaactggcaaatcagggcttagaaactcaaggaccgtctatagcattagccaatgat
aaaaaacagacacttgccgcacatatggattctcctgaagataagccacttatcattaaa
gccaaaaataccgagtcaacttcgctgatggatttgttattgccaccagatgagtttgat
gattatcaagaaccaaattggttaaatgaagaagatcaagatctgtcagagtcatatgaa
cgtttcgatgaagctgaagagacattggcaacccaaggttctttgacacctaccctacct
gatgatgcttataccgaagagtcacaagggatagttcgcactcacaatacagcgcgatta
gatgcatttaccagtagtggtaaacgtcagctcatcttagatacagaaaccacaggtttt
gatcccaaaacaggcgatcgaattgtcgaaattggcgttattgagttgattaatcgcaaa
ttgactggaaactcactgcatgtttatctaaatccgcaacggttagttggtgagtcggaa
aacatccatggtctcagcgatgcttttttgagtgataagcctttatttgctgatatcgcc
gatgagcttgaggcatttttggtgggtgcggaagtgattgctcataatgcaagcttcgac
atgcgcttcttggaagccgaaatggaaatggctgggcgtcggcctctttctgagcaaatc
acagtcactgatacattggccattgcgaagcgcaaacatccagggcaaaaaaactcgctg
gatgcattagctaaacgttatgaaatcaaagagcgtgatcgtacctttcatggcgcatta
ctagacgctgagattctagcggacgtatatctgctgttgactggtggtcaagttacattg
gatatggatactcaggaggaacgcagcaatcaaatcaatgaaagccgtccgcgtattcag
cgtaaactcgctgttgtaaaagcccatacagacgaactcaatcttcatcaagcatggata
gcggaaatggatagtggtcgggatggcgctatttctatttggcataaatgggaacaaagt
caaacttcatag
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