Aquirhabdus parva: HYN46_10410
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Entry
HYN46_10410 CDS
T05575
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HYN46_10410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbah03021
]
HYN46_10410
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_10410
Enzymes [BR:
mbah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HYN46_10410
Transcription machinery [BR:
mbah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HYN46_10410
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HYN46_10410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AXI03214
UniProt:
A0A345P7F5
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All DBs
Position
complement(2324209..2325216)
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AA seq
335 aa
AA seq
DB search
MMSTANEFLTPHAIKVDAVSGTSAKVILEPLERGFGHTLGNALRRILLSSLTGAAVVEAE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFEQDEATLTIDKQGPGAVTAADLQLPHN
VEIVNPDHVIAQLGANGHLKMRLKVTRGRGYEPADIRYPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLVIELETNGTVDPEEAIRKAATILQQQIAIFVDLQKDHAPEP
VTSREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLSLGLRLDNWPPASLRVDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcactgcaaatgagtttctaaccccacatgcgattaaagtcgatgcggtgtct
ggaacctcggcaaaagtaattctagagccgcttgagcgtggctttggccacacgctggga
aatgctttacgccgtattcttctctcttcactcactggcgcagccgtggttgaagcagag
atcgaaggtgtagagcatgagtacagcacactcgaaggcttgcaacaagacatcgttgag
cttcttctgaatttgaaaggtttgtctatcaaactgtttgaacaagacgaagcgacgttg
actattgataagcaaggtcctggtgcagtgactgcagctgacctacaattgccgcacaat
gttgagatcgttaatcccgatcacgtcattgctcagttgggtgctaatggtcacctcaag
atgcgcttaaaagtcacgcgtggtcgtggctatgagccagcagatattcgctatccagaa
ggggaaacccgtccagttggccgtctgcagcttgatgcaagctatagtccgattaagcgt
gtttcttacaccgttgagaatgcgcgtgttgagcagcgtactgatttggacaaactcgtt
atcgagcttgaaacaaatggtaccgttgatccagaagaagcaattcggaaggccgcgacg
atcctgcaacaacaaatagctatttttgttgacctgcaaaaagaccatgcaccagagcca
gttacaagtcgtgaagaggttgatccaattctcttgcgtcctgtagatgatttggagcta
actgttcgttctgcgaactgtctgaaagcggaaaacatttattacattggcgatctggtt
cagcgtactgaagttgaactgctcaagactccaaatttgggcaaaaagtcgcttaccgaa
atcaaagatgtattggcttcgaaaggcctgtcactcggtttacgtttggataactggcca
cctgccagcctacgtgtcgatgaccgcttcgcctaccgtagccgctaa
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