Aquirhabdus parva: HYN46_11135
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Entry
HYN46_11135 CDS
T05575
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN46_11135 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbah03019
]
HYN46_11135 (recQ)
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_11135 (recQ)
Enzymes [BR:
mbah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN46_11135 (recQ)
Messenger RNA biogenesis [BR:
mbah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN46_11135 (recQ)
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN46_11135 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AXI03347
UniProt:
A0A345P7T8
LinkDB
All DBs
Position
2464612..2466786
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AA seq
724 aa
AA seq
DB search
MPQPHSSQTSALQILSQTFGYDHFRGQQAQIIETAVQGKNALVLMPTGGGKSVCYQIPAL
LRAGITIVVSPLIALMKDQVDTLRELGIRAAYLNSSLSMSEQRDVESALQQGNLDLLYVA
PERLLSEHFLNRLDQTQLALFAIDEAHCVSQWGHDFRPEYQQLGLLATRYPHIPRMALTA
TADKRTRADIIQVLSLQNAPVFLSSFDRPNIRYSIVEKDNGRKQLIDFIQQQPEGSAGIV
YCLSRKRVEETAEFLQSKNLPALAYHAGLPQAERIRVQDEFLLEEGRIVCATVAFGMGID
KPNVRFVAHLDLPKSLEGYYQETGRAGRDGLPSEAWMAYGLGDVVSVRRMLAMSDAPPEV
KRIEAGKLDALLAYCETASCRRQILLTYFGEMGSLPCGNCDICQNPPSTWNATVAAQKVL
SAAIRTGNRFGAAHLVDVLLGSETDKVKQFGHHELPTFGIGQDLSEATWRNVIRQLVALG
YLLPDLEGFGGLMSSEKARDLLKGKETLWLRELPAVKVKTSRQDRTSPKASDLPADAQLR
FDALRALRLSFAQAQKVPPYIIFNDATLREMALLDPDTTEKLKMISGVGEQKLARYGQGF
LDRLSEVRSAPTDQPMSYPEPAQEKVDTLTATLELVNRGMDRAQIAEHRGLSVDTIGGHL
LKLYHASKVTKHEILFLESHELLEIQKTAQELNLKPKQTATKALKEALNHQYGYADLNVA
LWLW
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccacagccccactcatcacaaacctccgcattacagatactgtcccagacttttggc
tatgatcattttcgcggtcaacaagctcagattattgaaactgccgtgcaaggtaaaaat
gccttagtcttgatgcccactggcggtggcaaaagtgtgtgttatcagattccagcgcta
ttacgtgcaggtattaccatcgtggtatctccccttatcgctttgatgaaagatcaagtg
gatactttacgggaactggggattcgcgcagcgtacttgaatagctctctctccatgagt
gagcaacgagatgttgagtccgctctccagcagggcaacctagatttgctctatgtcgct
ccagagcgactattaagtgaacattttttaaatcgccttgatcaaacgcaactcgctcta
tttgccatagatgaagcgcattgtgtcagtcaatggggacacgatttccgccccgaatat
cagcagttgggcttgcttgcgacacgctaccctcatatcccgcgcatggccctcaccgct
actgccgataagcgaacaagagcagacattattcaggtcttaagcctgcaaaatgcgcct
gttttcctctccagttttgatcgccccaatattcgctatagcattgttgaaaaagacaat
ggacgcaaacaactgatcgattttatccagcagcagcccgaaggttcggcgggaatcgtc
tattgtctttcccgcaagcgcgttgaggaaaccgcagagttcttacaaagtaagaacctt
cctgccctcgcctatcatgcgggtttacctcaagccgaacgcatccgggttcaagatgag
ttcttgcttgaagaagggagaattgtttgcgcaactgttgcttttggtatggggattgat
aagcccaatgtgcgctttgtcgcgcatctagacttaccgaaatcccttgaaggatattat
caagaaacgggtcgtgccggacgtgatggattaccttctgaagcctggatggcgtatggg
cttggtgatgtcgtatctgtacgccggatgctggcgatgtccgatgcgccacccgaagtt
aaacgtatcgaagcaggaaagctggatgcactcttggcttactgtgaaacggccagttgc
cgtcgccaaatcttactcacctattttggagaaatgggttcactgccctgtggcaattgt
gatatttgtcagaacccacccagcacttggaatgctacggttgccgcccaaaaagtgttg
tctgccgcaattcgcacaggaaatcgctttggcgcggctcacctcgttgatgtgctactc
ggctcagagactgacaaagtcaaacagtttggacatcatgaattgcctacctttggtatt
gggcaagacttatccgaagcaacatggcgtaatgtgattagacaactcgtcgctttaggc
tatctgttaccggacttggaaggctttggcggtttgatgagcagtgagaaagctagagac
ctgctcaaagggaaagagacgctttggttacgggaactgcctgccgtgaaagtcaaaacc
tctcgccaagatcgaacatcacctaaagctagtgatctccctgctgatgcacagctccgc
tttgatgccttacgtgccctgcgtctgtcctttgcacaagctcagaaagttcctccctat
attatcttcaacgatgcgaccttacgtgagatggcacttctcgatcccgacaccaccgag
aagttgaaaatgatcagcggggttggtgaacagaaacttgcacgctatggacaaggtttt
ctagatcgcttaagtgaagtccgttcagcgcctacagaccaaccgatgagttacccagag
cctgcgcaagagaaagtcgacacgttgactgcaacactagaactggtgaatcgcggtatg
gatcgcgcgcaaattgcagaacacagaggactttctgttgatacgatcggaggacattta
ctcaagctgtatcatgccagcaaggtgacgaagcatgagattttgttcttagaatctcat
gagctgcttgagattcaaaagaccgctcaagaacttaaccttaaacccaaacagaccgcc
accaaagcacttaaagaagcgcttaatcaccaatatggatacgccgatttaaatgtggca
ctgtggttgtggtaa
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