Aquirhabdus parva: HYN46_12065
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Entry
HYN46_12065 CDS
T05575
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN46_12065 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbah03019
]
HYN46_12065 (pcnB)
Enzymes [BR:
mbah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HYN46_12065 (pcnB)
Messenger RNA biogenesis [BR:
mbah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HYN46_12065 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AXI04675
UniProt:
A0A345PBL6
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All DBs
Position
2683121..2684842
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AA seq
573 aa
AA seq
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MKTLSASSLGLNESMVSAAILDVIDTLMRAGFKAYIVGGGVRDLLLGLRPKDFDAVTNAT
PAQIREVFGKRSRIIGRRFELAHVYSGREMIEVATFRAPPRKVSTTASGMITRDNVWGTI
QQDYVRRDFTINAMYYQPREGVVLDFTHAISDIKNKQLTLQGKPTVRFEEDPVRMLRTLR
FAAKLEFTIDPEITKVLTPAMTQLLLEVSPHRIYDETQKMFSGGHLAPLLPLMVQYHVWN
RLFVDVSPELTPLIKQAAENTDARIAIGKSINPAFFYAVLLWEPFLARVKELVATGAPHS
IAWTQAGLDVLRRQSKHTAIPRFSEMFIREVWELQPRLEQPKPRQVPALAAHPRFRAGFD
FLLMREQTGDVLVGTMGQWWHDYQTLSNDGRERAIADLNRLQQRLQRKRQAGETVQPLQA
VIAEADHSVSTVEITAQNTVDNATLNITTPTTKAKRVRNRKPKTATHEQTLAALAAEVQE
AAIFDESTPLKSAPTREKPLESVEAIQLLPSDDPAMIHANLRAKRRSNRNDSQGSSNGSD
TRYSLAPRRRQPRSKPIQIEPTIAPSTSAEDAS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
ctgaaaaccctctccgcctcaagtttaggtcttaacgaatccatggtttccgccgcaatt
ttggatgtcatcgacaccctcatgcgtgcaggatttaaggcatatatcgttggcggcggt
gtacgcgacttattattgggtttacgtcctaaagattttgatgcggtaaccaacgcaact
ccggcccagattcgcgaagtttttggcaaacgttcacgcattatcggacgacgttttgag
cttgctcacgtctactccggccgtgagatgatcgaagtcgccaccttccgcgcccctcca
cgcaaagtctcaacaactgcttctggcatgatcacccgggacaacgtctggggaacgatt
cagcaggattatgtgcgccgtgacttcaccatcaatgccatgtattaccagccacgtgaa
ggagtcgttctagactttacccacgccatttcagatatcaaaaataagcaactgacctta
caaggcaaacctaccgtccgctttgaagaagatccggtacggatgttgcggaccttgcgc
tttgcggcgaaactcgagttcacgattgatcctgagatcaccaaagtcttgacacctgca
atgacccaattattgcttgaagtctccccacaccgtatttacgatgaaacccaaaagatg
ttttcaggaggtcacttagcaccccttctgcctctcatggttcaatatcatgtctggaat
agactctttgttgacgtttctccagaactcacacctttgatcaagcaagctgcagaaaac
acggatgcgcggatcgccatcggcaagagcattaaccctgcgttcttttacgccgtgttg
ctctgggaaccgttccttgctcgcgtcaaagaactggtagccacgggcgctccgcattcc
atcgcttggacacaagcgggtcttgatgttctccgtcgtcagtctaaacacaccgccatt
ccacgctttagcgaaatgttcatccgtgaagtatgggaattacagccgcgtttagaacag
ccaaaaccgcgccaagttccagcactggctgcacacccgcgctttcgtgcaggctttgac
tttttgcttatgcgtgagcaaaccggtgatgtattagtaggcaccatggggcaatggtgg
catgactaccaaactctgagtaatgatggtcgtgaacgcgccattgccgacctcaaccgt
ttgcagcagcgtctacaacgtaaacgtcaagcgggtgaaactgtacagcccttacaagcg
gtaatcgcggaagctgatcatagcgtttctacagtagaaatcacggctcaaaacacggtg
gataacgcaacattgaatatcacgacaccgacaactaaagcaaagcgtgtacgaaaccgt
aagcccaaaacagcaacacatgagcaaacccttgcagcgcttgcagctgaagtacaagag
gcggcgatttttgacgaaagcacgccattaaaatcagccccaacacgtgaaaagccattg
gagtcggtggaagctattcagttactgccttccgatgatcctgcgatgatccatgccaat
cttcgtgcaaagcgccgatccaatcgtaacgactcccaaggatcaagcaatggcagcgat
actcgctatagcctcgccccacgtcgtcgtcaaccacgcagtaaaccgattcaaatcgag
ccaactattgcgccgtcaacctcagcagaagacgcgtcataa
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