Aquirhabdus parva: HYN46_13270
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Entry
HYN46_13270 CDS
T05575
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYN46_13270 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_13270 (recD)
Enzymes [BR:
mbah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HYN46_13270 (recD)
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYN46_13270 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
Helicase_RecD
SH3_13
SLFN-g3_helicase
ResIII
DEAD
AAA_16
Herpes_Helicase
NPHP3_N
nSTAND3
PhoH
T2SSE
AAA
PIF1
HerA_C
NACHT
AAA_7
TrwB_AAD_bind
Mg_chelatase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AXI03716
UniProt:
A0A345P8V7
LinkDB
All DBs
Position
complement(2951018..2952751)
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AA seq
577 aa
AA seq
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MSDRILLKTPQQDTQDEVPAWSQVLAQNLLGKFPETQAHTRETLAGYIVQLGTALELGDT
CLKQTTNHLNPEEAEWLRHPLVASGEHALTQPAPLVVEQADAESRYVYFYRHWHQEWKLA
ERLAALLNPATAPAAVAVDLSQETSLKDLQRQAIELAARHPFTLITGGPGTGKTYTLARI
VKALQQAAPQLRVALAAPTGKAAQRMQSVLSNEFKQAGVSGAQIQTAQTIHRLLGLGGRS
TPRYHRSEPLPFDLIVIDEGSMLDLALASLLFDAIAVGTRVIILGDANQLAAVDAGAVLA
DLDAVPALAPYRVALQESSRFKADEGIGLLAAGVLNQQEDAVLKALTTSAQVQYINLAKT
PNSAVFHQLWQGFQPYFEVLLKLKGASHPLTEDQVKALFLAFDQFRVLCAQRAGDLGAHA
INRSIGEALQQALGHSLIKREGWYSGRPAMMTRNDYGLRISNGDIGVCLVDQTGREWVYF
PDRPAPIAATRLPPEQIETAFALTIHKSQGSEFRQVAMVLDDSAEEMLTRELIYTAITRA
KEGVQVWSKQALLLQAIHKKSNRISGLMNQIARKIAG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataggattcttttaaagacgcctcaacaggacacccaagatgaagtccccgca
tggtcacaggtcttggcgcagaatctgttaggcaaatttcctgagactcaagcgcatacc
cgagaaacccttgcggggtatatcgtgcagcttggaactgcacttgagctgggtgatact
tgccttaaacaaacgaccaatcatttaaaccctgaagaggcggagtggctcagacatccc
ctcgtggcaagcggcgaacatgccttaactcagcctgcaccgctggttgttgaacaggcg
gacgcagagtcgcgctatgtctatttttatcgccactggcatcaggagtggaagcttgct
gagcgcttggcagctttactcaatccagcgactgcaccagccgcagttgctgtggatcta
agtcaagaaacatccctaaaagacttacagcgccaagcgattgagctggccgcgcgtcac
cccttcaccctgatcactggcggacccggcacaggcaaaacctatacgctggcgcgtatt
gtcaaagccttacaacaagcggcgcctcaactccgcgttgcattggccgcgccgactggt
aaagccgcgcagcggatgcagagcgtcctgtcgaatgagtttaagcaggcgggggtgagt
ggtgcccagatccaaactgcgcaaactatccatcgcttgctcggtttaggtgggcgtagt
acgccgcgttatcaccgcagcgagccgttgccatttgatctgatcgtcattgacgaaggt
tcgatgctggatctggcactggcaagcctgctctttgatgccattgcagtcggtactcgc
gtgattattttgggcgatgccaatcaattggccgccgtggatgcaggcgcggtactggct
gatctggatgcagtgccggctcttgccccctatcgtgtggcgctgcaagagagtagccgc
tttaaagctgatgaagggattggtttattggccgcaggggtgttgaatcagcaggaagat
gcggttcttaaggcactgaccaccagtgcgcaggtgcaatatattaatctggccaaaacc
ccaaatagcgccgtgtttcatcaactctggcagggatttcagccttattttgaggtactg
cttaagctgaaaggggcgagccatcccttgacggaagaccaagtaaaagccctgttttta
gcctttgatcagtttcgagtgctctgtgcccaacgtgcaggcgatctcggtgcccatgca
attaatcgttctatcggtgaagccttgcagcaggcgctgggccacagtctgattaagcgt
gagggctggtatagcggtcgtcctgccatgatgacccgcaatgactacggtctacgcatc
tccaatggcgatatcggtgtttgtctggtcgatcagacggggcgggagtgggtatatttt
cctgatcgtcctgctccgatcgccgccacacgtttaccaccggagcagatcgaaaccgct
tttgcattgaccatccacaagtcacagggctcagagttccgtcaggtggcgatggttttg
gatgacagtgcggaggagatgctcactcgggagctcatttataccgcgattacgcgggcg
aaagagggtgtacaggtctggtcaaagcaagcgctgctattgcaagcaattcataaaaaa
agtaatcggatcagtggattaatgaatcagattgccagaaagattgcagggtag
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