Aquirhabdus parva: HYN46_13280
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Entry
HYN46_13280 CDS
T05575
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYN46_13280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_13280
Enzymes [BR:
mbah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HYN46_13280
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYN46_13280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXI03718
UniProt:
A0A345P8V9
LinkDB
All DBs
Position
complement(2956515..2960111)
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AA seq
1198 aa
AA seq
DB search
MLRIVQSQRIERLFEEMLSFFADHPLGVFESRQILIPSHGVGVWLKLYLANQHGIAAQVS
TDFIGAFQWELYGRLAERDPNDLSQKIQQQAPLSGSIMRWKIFAYIWQVYLSTFTSGGSQ
SIDPAARTALSFLLQKLMTHQVHRSSTDQQARNDAEVKSKIWVLSAQIAQVFAGYVTYRP
EWLRIWGRGGLLRLSGEDKPDWLVERYAEMQTWQAWLWKTLFAETFERREAEVQQFWTTL
QKDPTQAKKLPKSLTIFTVIQLPPAELMFIRQLAQYVDVTLLHYNPSQEYWADLVDSRWL
KRRQSERALDAQGRETHPLLTRMGKQAREVFKLLVNLSGGEFTEQVQEVWKDAFVESTSL
NQPTVLQQIQQHALDLSNVKDWDFDPQDQSLAIHACHSALRQLEVLREEIIQWLGADVAK
SASRLPSDILVLVPDLNDVAPLIRAVFSSPSTRTFESDAEISVPIEITGLAAPEVEALWQ
AFAGRFMLLAGRLSCETLLDWLALTPVQQSYNLSVPQVTRIGELLVEAGFRRGFDGAHLA
QTLSAADVDVRFTLRFALDRLILGMAMPVAMLYADTLPMTTLMRDDFELIAVMEQLYQDL
NQHRGELTTQRSIAEWLSILRADLQQAFSAERDTRGWASLMQALDDMDKNTQAALIHAGS
EDGFVGLPLRFVLEELQAALTASMQSSTPTGRVTFARLGTMRPLPYRVIAVLNLDTGKFP
KREQKNTFDLIGAFPSVLGDRSRTEDDLGAFLDALLLASDACWLFYNGQDVQDDQPRLPA
APVQELMDFLRDHLSPMPSSSDPEQRVSPLDQFIHQRHTLLPFEQANFDPRQPLGARGVW
FEVAQQLNQQTLQSDPLVWADLSTNKVQDADAEIGMINANQLIKDLTQPARYFMAAARIG
RIYLEEGLSGYEPLTLNKLDEYQLRHQFQLAKQSAQPLQATQWSAALPIGAAGKAYWQKG
EREQVSIEQRLQLYGGFVNPLTERLLKVALPETDILRHSERAEVQLSIRVPTDQQASMWL
SQSASSGRGKHLLRFWIEHLLWQVWRKTTAQEVEQGIGQRIGVYSAQTLIAQPMAMEDAL
KHLQDWLYVWQLAAKRPFVLPPALVVDAFKIDKKTGEVKITALDELLQKWLTADDFNAFV
PPQQNEDCALHPDWQLILQGQDPAQAFMRDFERYAEVLYAPLVEQISIADEEIGGASK
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaatagtgcaaagccagcggattgagcgtctttttgaagagatgctgagcttc
tttgccgatcatccacttggggtgttcgagtcgaggcaaatcctgattccgtcgcatggg
gtcggggtgtggttaaagctttacttggccaatcagcatggcatcgctgcccaagtctcg
accgattttatcggtgcgtttcagtgggaactctatggacgtctagcggaacgcgatccc
aatgacctatcgcaaaaaatccagcagcaagcgccactgtccggcagcatcatgcgctgg
aaaatctttgcctatatctggcaggtttacctaagtacctttacaagtggtggtagccaa
agcattgatcccgccgcacggacggcactcagttttttactccaaaaactgatgactcac
caagtacatcggagtagcaccgatcagcaggcgcgtaatgacgccgaggtgaaaagcaaa
atctgggtgctgtcagcacagatcgcacaagtttttgctggttatgtgacctatcgacct
gagtggttacggatctgggggcgcggtggattgctgcgtctatctggtgaggacaaaccg
gactggctggttgaacgttatgccgaaatgcagacgtggcaagcatggctatggaagacc
ctgtttgccgaaacctttgaacggcgagaagccgaagttcagcagttctggaccaccctg
caaaaagatcctacgcaggcgaaaaaattacccaaaagcttgaccatttttaccgtgatt
caactgccgccggccgagctgatgtttatccgccagctagctcagtatgtggatgtgacc
ttactgcactataacccctcgcaagaatactgggcggatctggtcgatagccgctggctt
aaacgtcgccagagtgagcgtgcactggatgcccaaggtcgcgagacgcatccactgctg
acccggatgggcaagcaagcgcgggaagtctttaaactgttggtcaatttgtcgggtggt
gagtttaccgagcaggtgcaagaggtctggaaagacgccttcgttgaatcgacaagcctt
aatcaacccactgttttacagcagattcagcagcacgccttggatctgtccaatgtcaaa
gattgggactttgatccacaggaccagtcactcgcgatccatgcctgccattccgcattg
cgccagcttgaggtgctgcgtgaggagattatccagtggcttggggccgatgttgctaaa
agtgcttcgcgtttgccttccgatattctggtcttggttccggatcttaatgatgtcgcc
ccgttgattcgcgcggtgttcagcagccctagcacgcgtacgtttgagagcgatgccgag
atcagtgtgccgattgagatcacagggcttgcggctcctgaggttgaagccttgtggcaa
gcctttgcgggtcgttttatgttgctggcagggcgtctatcttgtgagaccttgctggat
tggttagcactcacgccggttcagcagagttataacttaagcgtgccgcaagtgacgcgg
atcggtgagctattggttgaggcgggttttcggcgtggtttcgatggcgcgcacctggcg
cagactttaagtgcagccgatgtggatgtgcgtttcaccttgcgctttgcgctggatcgt
ttgattctgggcatggcgatgcctgtggctatgctttatgccgacaccttgcccatgacg
acgctcatgcgtgatgactttgagttgatcgcggtgatggagcagttgtatcaggactta
aaccaacatcgcggcgaactgacgacgcagcgtagtattgcagagtggttgtcgattctg
cgcgcggatctccagcaggcctttagtgcggagcgcgatacccgcggttgggcaagcctc
atgcaagcgctagatgatatggataaaaacactcaggccgcactcatccacgcaggctca
gaggatgggtttgttggactgccattgcgctttgttcttgaagagctgcaagccgccctg
accgccagtatgcagagctccacgccgacaggtcgcgtgacctttgcccgtctcggcacc
atgcgtccgctaccgtatcgcgtcatcgcggtgctcaatctggatactgggaaattcccc
aaacgtgaacaaaagaatacctttgatttgatcggcgcattcccatcagttctgggtgat
cgttcacgtaccgaagatgatcttggtgcatttctggatgctttgttgctcgcatcggat
gcctgctggctgttttacaatggacaagacgtgcaggatgatcaaccgcgcctgcctgcg
gcacccgtgcaagagctgatggattttctacgtgatcatttaagtccgatgccgagttcc
agcgaccctgaacaacgggtatctccactagatcagttcattcatcaacgacataccctg
ctgccgtttgaacaagccaactttgacccgcgtcagcctttgggtgcacgcggtgtctgg
tttgaagtcgcgcagcaattaaatcaacagacgttgcaatctgatccgttggtctgggcg
gatctgtccacgaacaaagtacaggatgcagacgctgaaatcggcatgatcaatgccaat
caattgattaaagacttgacccagccagcgcgttatttcatggcagcggcgcggatcgga
cggatttatctggaggagggcttatccggctatgagccactgaccctcaataaactcgat
gagtatcaactgcgccatcagtttcaacttgccaagcagagtgcacagcctttgcaagcc
acgcagtggtctgcggcactgccgatcggtgcggcaggcaaggcgtattggcaaaaaggt
gagcgagagcaagtcagcattgaacagcgtttgcagctctacggcggctttgtgaaccca
ttgaccgagcgtttgcttaaagtcgcactccctgaaacagatattttgcggcattcagag
cgggcagaggtgcaactttcgattcgtgtaccgaccgatcagcaggcgtccatgtggctc
agccagtcagccagtagtgggcgcggtaagcatttactgcgcttctggattgagcatttg
ctgtggcaagtatggcgcaagaccaccgcgcaagaggtcgagcaagggattggacagcgc
atcggagtgtatagcgcgcagacgttgattgcccagccaatggcgatggaggatgcgttg
aagcatttacaagattggctgtatgtctggcaactcgctgcaaagcggccttttgtactg
ccgccagcgctggtcgtggatgcgttcaagatcgataaaaagactggtgaggtgaagatc
accgcactcgacgagctgctgcaaaagtggctgactgccgatgatttcaatgcctttgtt
ccaccgcagcaaaatgaagactgtgctctacatcccgactggcagttaatcctccaagga
caagaccccgcacaagcctttatgcgtgattttgagcgctatgcggaagtgctatatgcg
ccgctcgtagagcagatcagtattgcggatgaagagatcgggggcgccagcaaatga
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