Mycobacterium basiliense: MB901379_00853
Help
Entry
MB901379_00853 CDS
T07125
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mbai
Mycobacterium basiliense
Pathway
mbai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MB901379_00853 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbai03021
]
MB901379_00853 (rpoC)
03400 DNA repair and recombination proteins [BR:
mbai03400
]
MB901379_00853 (rpoC)
Enzymes [BR:
mbai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MB901379_00853 (rpoC)
Transcription machinery [BR:
mbai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MB901379_00853 (rpoC)
DNA repair and recombination proteins [BR:
mbai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MB901379_00853 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VDM87314
UniProt:
A0A3S4BD54
LinkDB
All DBs
Position
I:952408..956370
Genome browser
AA seq
1320 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMMVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADARRKVRDGGEREMRQLRDRAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELIDRYGEYFTGAMGAESIQKLIENFDIDAEADSLRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVDGDKGEYQ
PAAQDSAETGAYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPAEIEDALFGHNGWQPGD
AWTAETTLGRVLFNELLPLGYPFVNKQMHKKVQASIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDQYEERADKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALREHYPSDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPVKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGILVE
LAERQAGLDGTVSLIRDPYIETSAYARTLGTDAVDEAGNVIVARGEDLGDPEIDALLAAG
ITQVKVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFH
QGGVGEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGERFYKITIVPDDGGEEVV
YDKLSKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVR
EVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLIDRAEFEAENRRVVAE
GGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGK
LIPAGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgtatcggcctcgccaccgcggaggacatc
aggcaatggtcctacggcgaggtcaagaagccggagacgatcaactaccggacgctgaag
ccggaaaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgtgagcgctgtggcgtg
gaggtgacccgcgccaaggttcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggagtgcccagccggctcggctacctgctggacctg
gcgccgaaggatctggaaaagatcatctacttcgccgcctatgtgatcacctcggtcgac
gacgagatgcggcacaacgagctgtccacgctcgaagccgaaatgatggtagaacgcaag
gcggtcgaggaccagcgggacgccgatctggaggcgcgtgcgcaaaagctggaggccgac
ctggccgagctggaggccgagggtgccaaggccgacgcgcggcgcaaggtgcgtgacggc
ggtgagcgtgagatgcgtcagctccgcgaccgggcccagcgtgagttggaccggctggag
gacatctggagcacgttcaccaagctggcgcccaagcagctgatcgtcgacgagaacctc
taccgcgagctgatcgaccggtatggcgagtacttcaccggcgccatgggtgccgagtcg
attcagaagcttatcgagaacttcgacatcgacgccgaggccgactcgcttcgcgatgtg
atccggaacggcaagggacagaagaagcttcgtgcgctcaagcgtctcaaggtagtcgcc
gccttccagcagtcgggcaactcaccgatgggcatggtgcttgacgcggtcccggtgatt
ccgccggagctgcgcccgatggtgcagctcgacggcggccggttcgctacgtcggacttg
aatgacctgtaccgccgcgtgatcaaccgcaataaccgactcaagaggctgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgataacggccgtcgcggtcggccggttaccggtccgggtaaccggcccctcaag
tcgctatcggatctgctcaagggcaagcagggccggttccggcagaacctgctcggtaag
cgtgtcgactactcgggccgctcggtcatcgtggtcggtccccagctcaagctgcaccag
tgcggcctgcccaagctgatggcgctggagctcttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagagcgccaagcgaatggtggagcgacagcgt
ccgcaggtgtgggacgtgctcgaggaggtcatcgccgagcacccggtgctgctgaaccgt
gcaccgaccctgcaccggctgggcattcaggccttcgaaccaatgctggtggaaggcaag
gcgattcagctgcacccgctggtgtgtgaggcattcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgagcgcggaggcgcaggccgaggcgcgcatcctgatgctg
tcgtccaacaacatcttgtcgccggcatcgggccgcccgctggccatgccgcggctggac
atggtgaccgggttgtactacctgaccaccgaggtcgacggggacaaaggcgaataccag
ccggccgcccaagacagcgcggagaccggtgcgtactcgtcgccggccgaagccatcatg
gccgctgaccgcggcgtgctctcggtgcgggccaagatcaaggtgcgtttgactcagctg
cggccgccggccgagatcgaggacgcgttgtttggccacaatggctggcagccgggcgat
gcgtggacggccgagaccacgttgggtcgggtgctgttcaacgagctgctgccgctgggc
tacccctttgtcaacaagcagatgcacaagaaggtccaggcgtcgatcatcaacgacctg
gccgagcgctacccgatgattgtggtcgcccagaccgtggacaagctcaaggacgccggg
ttctactgggcgacccgcagcggtgtcacggtctcgatggccgacgtgttggtaccgccg
cgcaagaaggagatcctcgaccagtacgaggagcgcgcggacaaggtggaaaagcagttc
cagcgtggcgctttgaaccacgacgagcgcaacgaggcgctggtggagatctggaaggaa
gccaccgacgaggtcggtcaggcactgcgcgagcactacccaagcgacaacccgatcatc
acgatcgtcgactcgggcgccacgggtaacttcacccagactcgaacgctggccggcatg
aagggtctggtgaccaacccgaagggtgagttcataccgcgtccggtcaagtcttcgttc
cgcgagggcctgacggtgctggaatacttcatcaacactcacggcgctcgaaagggtctg
gcggacaccgcgttgcgtaccgccgactcgggttacctgacccgccgtctggtggacgtg
tcccaggacgtcatcgtgcgtgagcacgattgcgagaccgaacgcggcatccttgtcgag
ctggccgagcgtcaggccgggcttgatggcacggtgtctctgatccgcgacccgtacatc
gaaacctcggcgtacgcgcggaccctgggcaccgacgcggttgacgaggccggcaacgtc
atcgtcgcgcgcggcgaggacctgggcgacccggagatcgacgccctgctggccgccggt
atcacccaggtcaaggtgcgttcggtgctgacctgcaccaccggcaccggtgtgtgtgcg
acctgctacgggcgttcaatggccaccggcaagctggtcgacatcggcgaggcggtcggt
atcgtcgccgcccagtccatcggtgaacccggcacgcagctgacgatgcgtaccttccac
cagggcggtgtcggtgaggacatcaccggcggtctaccgcgtgtgcaggagctgttcgag
gcccgggttccccgtggcaaggcgcccatcgccgacgtcaccggccgggttcgtctcgag
gacggggagcgcttctacaagatcaccatcgtccccgacgacggcggcgaggaagtcgtc
tatgacaagctctccaagcggcaacggctgcgggtgttcaagcacgaggacggttccgag
cgggtgctgtccgacggcgaccacgtcgaggtgggccagcagctgatggaaggctcggcc
gacccgcacgaggtgctgcgcgttcagggcccgcgcgaggtgcagatccacttggtccgc
gaggtccaggaagtctaccgggcgcagggtgtgtcgatccacgacaagcacatcgaggtg
atcgttcgccaaatgctgcgccgggtcaccatcatcgactcgggctcgacggagttcctg
cccggctcgctgatcgaccgtgcggagttcgaggcggagaatcgccgggtggtggccgag
ggcggcgagcccgcggccgggcgtcctgtgctgatgggtatcaccaaggcgtcgctggcc
accgactcgtggctctccgcggcgtcgttccaggagaccacgcgagtgttgaccgatgcg
gcgatcaactgccgcagcgacaagctcaacggtttgaaggagaacgtgatcatcgggaag
ctgatcccggccggtaccggtatcaaccgctaccgcaacatccaggttcagccgaccgaa
gaggcacgcgccgccgcctacacgatcccgtcctacgaggaccagtactacagcccggac
ttcggtcaggccaccggtgctgccgttccgctggacgactacggctacagcgactaccgc
tag
DBGET
integrated database retrieval system
