Mycobacterium basiliense: MB901379_02942
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Entry
MB901379_02942 CDS
T07125
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mbai
Mycobacterium basiliense
Pathway
mbai03030
DNA replication
mbai03430
Mismatch repair
mbai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MB901379_02942 (polC_1)
03430 Mismatch repair
MB901379_02942 (polC_1)
03440 Homologous recombination
MB901379_02942 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbai03032
]
MB901379_02942 (polC_1)
03400 DNA repair and recombination proteins [BR:
mbai03400
]
MB901379_02942 (polC_1)
Enzymes [BR:
mbai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MB901379_02942 (polC_1)
DNA replication proteins [BR:
mbai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MB901379_02942 (polC_1)
DNA repair and recombination proteins [BR:
mbai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MB901379_02942 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
TMV_coat
Motif
Other DBs
NCBI-ProteinID:
VDM89366
UniProt:
A0A447GFW3
LinkDB
All DBs
Position
I:3362861..3364873
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AA seq
670 aa
AA seq
DB search
MRLPKVTAMAAASGTQLSLAGLDPGAFPGIASPAMPAGDIDESDEVPLRQTTFVVVDLET
TGGRMTGTAQAPPDAITEIGAVKVRGGVVLGEFATLVNPQRNIPPQIVRLTGITTAMAGD
APTIDAVLPMFLEFIGDSVLVAHNAGFDIGFLRSAAERCDITWPRPKVLCTVRLARRVLS
REEAPSVRLGALARLFAVANQPTHRALDDARATVEVLHALIERVGNQGVHTYADLRGYLP
NVTPAQRRKRVLAAGLPHRPGIYLFRGPSDEVLYVGTAVDLRRRVSQYFNGADSRGRMKE
MVALADSVDHVECAHSLEAGVRELRMLAAHAPPFNRRSRFPHRWWWVVLTEEPFPRLSVV
RAPRHDQVIGPFRSRTEAADTATLLARFTGVRTCTKRLARSALHGPACPELEVSPCPAAR
DVTAERYAEAARRVVDLIDGVDNSAVATAVHQVADLAEHHRYESAARLRDRIATAVEVLW
RGQRLRTLTALPELIAAAPDGAGGYQLAVIRHGQLAAAGNAGRGIPPMPVVDAIQAGAQT
VVPARAPLRGALVEETALITRWLTTAGVRIVRVAAAAGGEHCTTTCGWASPLRSAGAWAA
WAASARSARLAAEQAPNSVAHRRQSGNMPSDLLAEPHPAREQLFGGAAVERRTGPLQPIL
PSRQPFSVAG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgcctaaagtcacggccatggccgcggcgagtggaactcagctgagtctggcc
gggctcgacccgggcgcctttccgggcatcgcctcgcccgcgatgccggccggtgacatc
gatgaatccgacgaagtgccgttgcgccagaccaccttcgtcgtcgtggacttggaaacc
acgggcggacggatgacgggcaccgcacaggctccgccggatgccatcaccgagatcggg
gcggtcaaagtgcgcggcggggtggttctcggggagttcgccaccctggtaaatccgcaa
cgcaacattccaccccagatcgtgcgattgaccggcatcacgacggcgatggcgggtgac
gctccgaccatcgatgcggtcctgccgatgtttctcgagttcatcggggattcggtgttg
gtcgcccacaacgccggattcgacatcgggttcctgcgttctgccgcggagcgctgtgac
atcacctggccgcgaccgaaggtcttgtgcacggtccggctggcgcgtcgagtcctcagt
agagaagaagcgcccagcgtgcgcctcggcgctctggcgcggctatttgctgtggcaaac
cagccaacgcaccgcgccctagatgatgcgcgcgccaccgtcgaggtgttgcatgccctc
atcgaacgagtcggcaaccagggcgtgcatacctatgccgacctgcgcgggtatctgcca
aacgtgaccccggcgcagcggcgcaagcgggtactggccgcgggattgccgcaccgtccg
ggaatctatttattccgcgggccgtccgacgaagtgctctacgtcggcaccgcagtcgac
ctgcgtcgccgggtgagtcaatacttcaacggcgccgactcccgaggccggatgaaagag
atggtcgccttggccgactcggtcgatcacgtcgagtgcgcgcactcgctggaggccggc
gtccgtgaactgcggatgcttgccgcacacgccccacctttcaatcgccgatcgaggttt
ccgcaccgttggtggtgggtggtgctcaccgaggaaccgtttccccgcctatcggtggtt
cgtgccccgcgacacgaccaagtcatcggcccatttcggtcccgcaccgaggccgccgac
acggcgacgctgctggcccggttcaccggggtgcggacctgcaccaagcggctagcgcgt
tcggcactacacggcccggcctgccccgagcttgaggtttcgccctgccccgccgcacgc
gacgtgacggccgaacgttatgccgaagcggcacgacgcgtggtggatctgatcgatggg
gtcgataactccgcagtggccacggccgtgcaccaggtcgctgacctagccgagcaccat
cgatatgagagcgccgcacggctacgcgaccggatcgccaccgccgtcgaggtgctgtgg
cgtgggcaacggttgcgcacgctaaccgccctgcccgaattgatcgctgcggcgccggac
ggcgccggtggataccagctcgctgtcatccgccacggccaactcgcggccgccggcaac
gctgggcgcgggatcccaccgatgccggtcgtcgacgccatccaggcaggtgcgcaaacc
gtggtgccggcgcgggcaccgctacgtggcgcgctggtggaagagaccgcacttatcact
cgctggctcaccacggcgggagtccgcatcgtgcgggtcgccgccgcggccggcggcgag
cactgcacgacgacctgcggctgggcctccccgctgcggtcggccggcgcctgggcagcg
tgggcggcatccgcacgctcggcgcgactggccgccgaacaggcccccaactccgttgct
catcgtcggcagagtgggaacatgccatcagacctgctggctgaaccgcacccagcgcgc
gagcagctgttcggcggcgccgctgtcgagcgccgcactggcccgctgcaacccatcctc
ccaagcaggcagccattcagcgtggccggataa
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