Mycobacterium basiliense: MB901379_03351
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Entry
MB901379_03351 CDS
T07125
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mbai
Mycobacterium basiliense
Pathway
mbai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MB901379_03351 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbai03019
]
MB901379_03351 (rng)
03009 Ribosome biogenesis [BR:
mbai03009
]
MB901379_03351 (rng)
Enzymes [BR:
mbai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MB901379_03351 (rng)
Messenger RNA biogenesis [BR:
mbai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MB901379_03351 (rng)
Ribosome biogenesis [BR:
mbai03009
]
Prokaryotic type
rRNA processing factors
MB901379_03351 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
IF2_N
PCB_OB
WHD_E2F_TDP
Motif
Other DBs
NCBI-ProteinID:
VDM89770
UniProt:
A0A3S4FPD8
LinkDB
All DBs
Position
I:complement(3847901..3850822)
Genome browser
AA seq
973 aa
AA seq
DB search
MEDDVASSDAGNEQIQRAELPDRLRVHSLARTLGTSSRRVLDALNALDGRIRSAHSSVDR
VDAVRVRDLLAEQSAEQSAAPAQAAADPADEPAAPGEPESRLILETQETVQIVETRAERP
HYMPLFVAPQPLPATADQDDEAADDDGADDSDGEDDEEQTDRPAGRRRRRGRRGRGRGRG
EQGGSDGQGQGGEDGDEPDQKGARGSGSADDTGGSDSQDPQDPQDSEDSEDGDDDSASAE
GGNRRRRRRRRRKSGSGDDNDDSPAPDDPPNTVVHERAPRSGGKSGNSNAAGSNEIKGID
GSTRLEAKRQRRRDGRDAGRRRPPVLSEAEFLARREAVERVMVVRDRVRTEPPHPGARYT
QIAVLEDGIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVN
WDAAGLGGADRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTG
ISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKADDIRADVARLQERWGQIEAQSA
EIKGKAAGAAVALYEEPDVLVKVIRDLFNEDFTGLVVSGDQAWATINDYVNSVAPDLVSK
LTKYEPVTGPDGQTGPDVFAVHRIDEQLVKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTG
KFTGSGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEA
LARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTSCPHCTGRGILLHADPVDSAPASG
RKSESGGRRNRRSKKGRAEETPVAKVPTHAPGEHPMFKAMAAGASSGSGRGDGESGESDE
EFTAEIDDQNAAALPNDTDDTGTDDELDDSDLDDADDEDDDEDADDDDDADEDDEDDEDD
EELDDDADLDDDDLDDDLEVDDSDNSAAEDDEDETHHGDRPGGPSVAAEVASGSGRPRRR
AAGRPAGPPIHLD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacgatgtcgcatcttcagacgcaggaaatgagcagatacagcgtgcggaactg
ccggaccgactaagagtccattccctggcgcgaacgctgggaacgagcagcaggcgggtg
ctggacgcgctgaacgcactcgatgggcggatccgcagcgcgcactccagcgtggaccgc
gtcgatgcggtgcgggtgcgtgatctgctggccgaacagtcagcggaacaaagcgccgct
cccgcgcaggcggccgccgatcccgccgatgaaccagcggctcccggcgaacccgagtct
cgcctgatcctggaaacccaggagacggtgcagatagttgagacccgggcggagcggccc
cactatatgccgctgttcgtggcgcctcagccgctccccgcgacggcagatcaggacgac
gaagccgccgatgacgacggtgccgacgactccgacggtgaggacgacgaagagcagacc
gaccggccggccggccggcggcgtcgccggggccgtcgcggccgtggccggggacgcggt
gagcaaggcggatcggatggtcagggccagggcggtgaggacggtgacgagcccgaccaa
aagggcgcccgaggctccggcagcgccgatgacaccggcggctccgactcccaagacccc
caagacccccaagactccgaagactctgaagacggtgacgatgacagcgcttccgcggag
ggcggcaaccgccggcgccggcggcgtcggcggcgcaagtcgggctccggtgacgacaac
gacgacagtccggcgcccgacgatccgcccaacaccgtcgtgcatgaacgtgcgccccgc
tccggcggcaagtccggcaactcgaacgctgccggtagcaacgagatcaagggaatagac
ggctcgacccggctggaagccaagcggcagcgccgcagggacgggcgcgatgcggggcgg
cgccgcccgccggtattgagtgaggccgaattcctggctcgccgcgaggcagttgagcgg
gtgatggtggtgcgtgaccgggtgcgcaccgagccgccgcacccgggcgcccgatacacc
cagatcgcggtgctcgaagacgggattgtcgtcgagcatttcgtgacttcggccgcctcg
gcatcgttggtgggcaacatctatctcggaatcgtgcaaaatgtcctgccgtcgatggag
gcggcgttcgtcgacatcggtcgtggtcgcaacggtgtgctctacgcgggcgaggtcaat
tgggacgccgcgggtctgggcggggccgaccggaaaatcgagcaggcgctcaaaccgggt
gactacgtggtcgtccaggtcagcaaggacccggtgggccacaagggagcacggctgacc
acccaggtgtcgctggccggccgttacctggtgtatgtgcccggcgcgtcgtcaactggt
atcagccgcaagctgcccgacaccgaacgccagcgactcaaagagatcctgcgtgaggtg
gtgccctccgacgcgggtgtcatcatccgcaccgcatccgaaggcgtcaaggccgacgac
atccgcgccgatgtggcccggcttcaggagcgctggggccagatcgaagcccagtccgcc
gaaatcaaggggaaggccgccggtgccgcggtggcgctctacgaggagccggacgtgctg
gtcaaggtcatccgggacctgttcaatgaggatttcaccgggttggtcgtctccggggac
caggcctgggccacgatcaacgactacgtcaattccgtcgcccccgatctggtttccaag
ctgaccaagtacgaaccggtcaccgggccggatggacaaaccggcccggatgtctttgcg
gtgcatcgcatcgacgagcaactggtcaaagcgatggaccgcaaggtgtggttgccatcg
ggtggcacgttggtgatcgaccgaaccgaagcgatgacggtgatcgatgtcaacaccggc
aagttcaccgggtcgggtggcaatcttgagcagacggtcaccaagaacaacctcgaggcg
gccgaggagatcgtgcgccagctgcggttgcgcgacatcggcggcatcgtggttatcgac
ttcatcgacatggtgttggaatccaaccgggacctggtgctgcgccggctgaccgaggcg
ctggcccgcgaccgcactcgccaccaggtatcggaagtgacttcgctgggtctggtccag
ctgacccgcaagcggctgggcacgggtttgatcgaggccttctcgacatcgtgtccgcat
tgcaccggtcggggcattctgctgcatgccgacccggtggactctgcgccggcgtctgga
cgcaagtccgaatctggggggcgccggaacaggcggtcgaagaagggccgcgccgaggaa
actccggtcgccaaagtccccactcatgctcccggcgagcacccgatgttcaaagcgatg
gccgctggtgcgtcctcggggtccggtcgcggtgacggggaatccggcgagtccgacgag
gaattcaccgccgagatcgacgaccagaacgcagcggcgttgcccaacgacaccgacgac
accggcaccgacgacgagctcgacgactcggatctggatgacgccgatgacgaggacgac
gacgaggatgccgatgacgatgacgacgccgatgaagacgatgaagacgatgaagacgac
gaggaactcgatgacgacgcggacctcgatgacgacgacttggacgacgacctagaagtc
gatgattcggacaattcggccgccgaagatgatgaggacgagactcatcacggtgatcgt
cccggcggcccatcggtagcggccgaggtcgcctcgggttccggacgtccgcgccggcgg
gccgcgggccgtcccgcgggtccgcccatacatttggactga
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