Mycobacterium basiliense: MB901379_03988
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Entry
MB901379_03988 CDS
T07125
Symbol
uvrD1_2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbai
Mycobacterium basiliense
Pathway
mbai03420
Nucleotide excision repair
mbai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MB901379_03988 (uvrD1_2)
03430 Mismatch repair
MB901379_03988 (uvrD1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbai03400
]
MB901379_03988 (uvrD1_2)
Enzymes [BR:
mbai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MB901379_03988 (uvrD1_2)
DNA repair and recombination proteins [BR:
mbai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MB901379_03988 (uvrD1_2)
MMR (mismatch excision repair)
Other MMR factors
MB901379_03988 (uvrD1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
VDM90389
UniProt:
A0A3S4FQ96
LinkDB
All DBs
Position
I:complement(4573816..4576107)
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AA seq
763 aa
AA seq
DB search
MSVHATDADQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIADRGVGVG
QILAITFTNKAAAEMRERVVGLVGDRARYMWVSTFHSTCVRILRNQASLIEGLNSNFSIY
DADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPHQAVSDLTDESDDLSRTV
ASVFGEYQRRLRAANALDFDDLIGETVAVLQTFPDIAQYYRRRFRHVLVDEYQDTNHAQY
VLVRELVGRDTEDGVPPGQLCVVGDADQSIYAFRGATIRNIEDFERDYPDATTILLEQNY
RSTQNILSAANSVIARNSGRRDKRLWTDAGEGELIVGYVADNEHDEARFVAEEIDALAER
GDITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLDNPG
DAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALQAAADGKVPMLNSRAEKAIAG
FVEMLDELRGRLDDDLGDLVESVLERTGYRRELEASTDPQELARLDNLNELVSVAHEFST
DQANAAAVEPEEEDVPDTGVLAAFLERVSLVADTDEIPEHSAGVVTLMTLHTAKGLEFPV
VFVTGWEDGMFPHMRALDDPTELSEERRLAYVGITRARQRLYVSRAIVRSSWGQPMLNPE
SRFLREIPQELVNWRRLAPKPSFSAPVSGAGRFGTPRSAPNRSGTSKRPLLVLQPGDRVT
HDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPVAKL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgcgaccgatgccgaccaattgctagaaggtctcaacccgcaacagcgc
caggcggtggtgcatgagggttcgccgctgctgatcgtcgccggagcaggttccggcaag
actgcggtgttgacccggcgcatcgcctatctgatcgctgaccgcggcgtgggggtcggc
cagattttggccattaccttcaccaacaaggccgctgccgagatgcgcgagcgggtggta
ggcctggtcggcgaccgggcccggtatatgtgggtgtccacgtttcactccacctgcgtg
cggatcttgcgcaaccaggcgtcgctgatcgaaggcctcaattcgaacttttcgatctac
gatgccgacgactcgcggcgtctactgcaaatgatcggtcgcgacatgggcctggacatc
aagcgatactcgccgcggctgctggccaacgccatttcgaacctgaagaacgagttgatc
gacccgcatcaggcggtgtcggatctaacagatgagtccgatgacctgtcgcgcaccgtc
gcctccgtgtttggcgaatatcagcgccgcctgcgtgcggccaatgcgctggacttcgac
gacctcatcggcgagacggtcgcggtgctgcagaccttcccggacatcgcccagtactac
cggcggcggtttcggcacgttctggtcgatgaataccaggacaccaaccacgcccagtat
gttctggtgcgggagttggtcggccgtgacaccgaagacggtgtgccacccggacagtta
tgtgtggtcggcgatgcagaccagtcgatctacgcgttccgaggcgccaccattcgcaat
atcgaagacttcgagcgcgactacccggacgccacaacgattctgctggaacagaactac
cgctcgacgcagaacattctgtccgcggccaattcggtgatcgcccgcaactccgggcgc
cgagacaagcggttatggaccgacgcgggcgaaggcgagctgatcgtcggctacgtcgcc
gacaacgaacatgacgaggccaggtttgttgccgaagagatcgatgcgctggccgagcgc
ggcgatatcacctacaacgatgtcgcggttttctaccgcaccaataattcttcgcggtcg
ctggaagaggtgtttatccgcgccggaattccgtacaaagtcgtcggcggagtgcgtttt
tacgagcgcaaggaaattcgtgacatcgtcgcctacctgcgtgtgctggacaatcccggc
gatgcggtcagcatgcggcgcatcctcaacacgccgcggcgcggcatcggtgatcgcgcc
gaggcgtgcgtagcggtgtacgccgagaacaccggcgccagcttcgctgacgcgttgcag
gccgccgccgatggcaaagtgccgatgctcaacagtcgcgccgagaaggcgattgcggga
tttgtcgagatgctcgacgaactgcgcggacgcctcgacgatgatctcggcgatttggtc
gagtcggtgctcgaacgcaccggctaccgccgggagctggaagcgtccaccgacccccag
gagcttgcccggctggacaacctgaacgaactcgtcagcgtcgcacacgaattcagcacc
gaccaagccaatgcggccgcggtcgaacccgaggaagaagacgtgccggacaccggtgtg
ctggccgcgtttttggaaagggtgtcgctggttgccgacaccgacgaaattccggagcac
agcgctggtgtggtcacgctgatgaccctgcacaccgccaagggtctggagttcccggtg
gtgtttgtgaccggctgggaggacggaatgttcccccacatgcgtgcgctggatgatccg
accgaactctccgaggagcggcggctggcctacgttggcatcaccagggcgcggcaacgg
ctctacgtcagcagagccatcgtccggtcttcgtggggacagccgatgctcaacccggaa
tcacgctttctgcgggagattccgcaggaacttgtcaactggcggcgccttgcgcccaag
ccgtcgttcagtgctccggtgagcggtgccggccggttcggtacaccgcgatcggcgccg
aaccgctcggggaccagcaagcgcccgctgctggtgctgcagccgggcgatcgagtgaca
catgacaagtacggcctgggccgggtcgaagaagtctccggtgtcggcgagtcggcgatg
tcgctgatcgacttcggtagctcggggcgggtgaagctcatgcacaaccacgccccggtc
gccaagctctag
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integrated database retrieval system
