Mycobacterium basiliense: MB901379_04537
Help
Entry
MB901379_04537 CDS
T07125
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbai
Mycobacterium basiliense
Brite
KEGG Orthology (KO) [BR:
mbai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbai03032
]
MB901379_04537 (topA)
03400 DNA repair and recombination proteins [BR:
mbai03400
]
MB901379_04537 (topA)
Enzymes [BR:
mbai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MB901379_04537 (topA)
DNA replication proteins [BR:
mbai03032
]
Prokaryotic type
DNA Topoisomerases
MB901379_04537 (topA)
DNA repair and recombination proteins [BR:
mbai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MB901379_04537 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
VDM90927
UniProt:
A0A3S4DWJ5
LinkDB
All DBs
Position
I:complement(5164789..5167590)
Genome browser
AA seq
933 aa
AA seq
DB search
MADPKTKGPGSRSGGGNGSGRRLVIVESPTKARKLASYLGPRYIVESSRGHIRDLPRAAA
DVPAKFKSEPWARLGVNVDADFEPLYIISPEKKSTVSELKGLLKDVDELYLATDGDREGE
AIAWHLLETLKPRVPVKRMVFHEITEPAILEAAENPRDLDIDLVDAQETRRILDRLYGYE
VSPVLWKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDILATLDASVSDPQAQPP
TFSARLSSVDGLRVATGRDFDSLGVLRKADEVVVLDEANATAMATSLRGSQLSVASAEEK
PYTRRPYAPFMTSTLQQEASRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSASAINA
ARNQARQLYGEEYVAASARQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLY
ELIWQRTVASQMADARGTTLSLRIGGRAGERQVVFSATGRTLTFAGFLKAYVETVDELAG
GEADDAERRLPHLTPGQRLDAVELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSI
IKTIQDRGYVYKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASGQERR
TDWLNNFYFGGDHGVADSVARSGGLKKLVGVNLEGIDAREVNSIKLFDDVQGRTIYVRVG
KNGAYLERTVTGDDGEPKPQRANLNDSLTPDELTLDVAEELFATPQEGRVLGVDPATGHE
IVAKDGRYGPYVTEILPEPPADASSEQPAKKGKKPVGPKPRTGSLLRSMDLQTVTLEDAL
KLLSLPRVVGVDPASGEEITAQNGRYGPYLKRGSDSRSLATEDQIFSITLEEALKIYAEP
KRGGRQSASAPPLRELGVDPASGKPMVVKDGRFGPYVTDGETNASLRKGDDVASITDERA
SELLADRRARGPVKRTARKTARKSPAKKAAKRT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacccgaaaacgaagggccctggaagccgtagcggcggcggaaatgggagcggc
cggcgacttgtcatcgtcgagtcgcccacaaaagcacgcaaacttgccagctatctgggg
ccgagatacatcgtcgagtcgtcccggggccatattcgcgatctaccgcgggccgccgcc
gatgttcccgccaagttcaagtccgagccgtgggctcgcctcggggtcaatgtcgacgcg
gatttcgaaccgctctacatcatcagcccggagaaaaagagcaccgtcagcgagttgaag
ggcctgctcaaggacgtcgacgagctctacctggccacggatggtgaccgtgagggcgaa
gcgatcgcctggcatctgttggaaaccttgaaaccgcgcgtaccggtcaagcgaatggtc
tttcacgagatcaccgagccggccatcctcgaagccgccgaaaacccccgcgacctggac
attgacctagtcgatgcgcaggaaacccgccgaatcttggaccggctctacggctacgag
gtcagcccggtgctctggaagaaggtggcgcccaagctgtcggccggccgggtgcagtcg
gtggccacgcgcatcatcgtgcagcgcgagcgtgaccggatggcgttccgcagcgcgtcg
tattgggacatccttgccacgctggacgccagcgtgtcggatccgcaggcccagccgccg
accttttccgcgcggctgtccagtgtggacggtctgcgggtagccaccggccgggacttc
gactcgctgggcgtcctgcgcaaagcggacgaagtggtggtactcgatgaggcgaacgcg
accgccatggccaccagcctgcgcgggtcgcagctgagcgtggcgtcggcggaagaaaag
ccctacacccgccgcccgtatgcccccttcatgacgtcgacgttgcagcaagaagcgagc
cgcaagttgcgcttctccgccgagcggacgatgagcattgcgcagcgactctacgagaac
ggctacatcacctacatgcgtaccgactcgacgaccctgtcggcgtcggcgatcaatgcg
gcccggaaccaggcacgccagctctacggtgaggagtacgtcgccgcgtcggcccgccaa
tacacccgcaaggtgaaaaacgcccaggaggcgcacgaggccatcaggcccgccggagag
acgttcgccaccccggacgccgtgcgccgcgaactcgacggcgacgagtttcggctctat
gagctgatctggcagcgcacggtggcctcgcagatggccgacgcccgcgggaccacgctg
agcctgcggatcggaggtcgagcgggagagcggcaggtggtgttctccgccactggtcgc
acgctgaccttcgccgggttcttgaaggcgtatgtggagaccgtggacgaattggccggc
ggtgaggcggacgacgccgagcggcggctgcctcatctgacgcccggtcagcggctggac
gcggtcgagctgacccccgacggacatgccaccaacccgcccgcgcgctacaccgaggcc
tcgctggtcaaggcgctcgaggagctgggcatcggccgcccgtcgacctactcgtcgatc
atcaagaccatccaggaccgcggctatgtgtacaagaagggcagcgcgttggtgccgtcc
tgggtggctttcgcggtaaccggtttgctcgagcagcatttcggtcgactggtcgactat
gacttcaccgccgcgatggaagacgaactcgacgcgatcgcttcgggccaggagcggcgc
accgactggctgaacaatttctacttcggtggtgaccacggcgtggccgattcggtggcg
cgctccggcggactgaagaaactcgtcggtgtcaacctcgagggtattgatgcgcgagaa
gtcaactccatcaaattgtttgacgacgtgcagggccgcaccatctacgttcgggtgggt
aagaacggggcctatctggaacgcacggtgaccggcgacgacggtgagccgaaaccgcag
cgcgccaatctcaacgactcgctgacccccgatgaactgacccttgatgtggccgaagag
ctgttcgccacaccgcaagagggacgtgtgctgggggttgatccggcaaccggccacgag
atcgttgccaaggacggccgctacgggccgtacgtgaccgagatcctgccggagccaccc
gctgacgccagttccgaacagccggcgaaaaaaggaaagaagcccgtgggtccgaaaccg
cgcaccgggtcgttgttgcgcagcatggatctacagacggtcaccctcgaggacgcgctc
aagctgctgtcgctgccgcgggtggtgggcgtggaccctgcctccggtgaggagatcacc
gcacagaatggccggtacggcccgtatctcaagcgcggcagcgattctcgctcgttggcc
accgaagatcagatcttcagcatcaccctggaggaggcgctcaagatttacgccgaaccc
aaacgtggtggtcgacagagcgcttcggctccgccgctgcgcgagctgggcgttgatccg
gcatcgggcaagccaatggtggtcaaggacgggcgatttggaccctacgtcactgatggc
gagaccaacgccagcctgcgtaaaggcgacgacgtggcgtcgatcaccgatgagcgggcc
tcggaattgctggccgaccggcgggcccgcggaccggtcaagcggaccgcccggaagacc
gctcgcaaatcaccggcaaaaaaggccgccaaacgcacctag
DBGET
integrated database retrieval system
