Methanosarcina barkeri 3: MSBR3_0206
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Entry
MSBR3_0206 CDS
T04533
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSBR3_0206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbak03400
]
MSBR3_0206
DNA repair and recombination proteins [BR:
mbak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSBR3_0206
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSBR3_0206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
T2SSE
P-loop_SecA
Kinesin
AAA_16
AAA_7
ACDC
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKB80784
UniProt:
A0A0E3SEX5
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All DBs
Position
291266..293278
Genome browser
AA seq
670 aa
AA seq
DB search
MNSSDQTSQPLSHKISETLRDSRYWNSPQFKLVSDFEPKGSQPQAIEKLVEGLKKSEHYQ
TLLGVTGSGKTYTVANVINQVKKPTLVIAHNKTLAAQLYNEFREFFPENRVEYFVSYYDY
YQPESYLPAKDQYIEKDAQINPKIEQMRLAATASLMSRQDVIVVASVSCIYGLGNPENFQ
KMGFELKVGDKVQRKEILQNLVEILFERNDLELMPGRFRVKGDTIDIIPGYFDNIIRIEL
FGDEVDRISEVDKQTGQRTEDMDYFFVYPARHYVIPEEEQKSAIQSILEELEEHLPELGL
LESHRLKQRTLYDMEMIQETGSCKGIENYSRHFDHRQPGEQPFCLLDYFPEDFLLVIDES
HQTIPQLHGMYNGDRSRKKSLVDYGFRLPSAYDNRPLKFDEFEKYMKNVIFVSATPADYE
REHSAQIVEQIIRPTGLVDPEVEIRPLEGQVRDVMQEVRKIVEKGDRALVTTLTKKLAEE
LTEYLARNEIKARYLHSDIKTIERTEIIRELRLGKFDVLVGINLLREGLDIPEVGFIGIL
DADKEGFLRNSKSLIQIIGRAARNASSKVVLYADNMTDSIKSAVTETERRRSMQIAYNKE
HGIVPTTIRKPIREKVVDITDTKHIPKTDIPNMIIELETEMKEAADRLDFERAIQVREMI
KKLEKEIKVV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttctgaccaaacatcacagccattatctcataaaatctccgaaacactaaga
gattcccgatactggaacagcccgcaattcaagctggtttccgattttgagccaaagggt
tcccagccgcaggcaatcgaaaaacttgtggaagggcttaaaaaaagtgagcactatcag
accctgcttggggtaacagggtcaggaaaaacctatactgttgccaatgttataaaccag
gtcaaaaaaccgacccttgtcattgctcataataaaacccttgcagcccagctttataat
gagttcagggaattcttccctgaaaacagggtagagtactttgtttcttattacgattat
tatcagccagagtcctatcttcctgccaaggaccagtatattgaaaaggatgcccagatt
aacccgaaaatcgagcagatgaggcttgctgctactgcttccctgatgtcgcgtcaggac
gttattgttgtggcatctgtatcctgtatctacgggcttggcaatcctgaaaatttccag
aaaatggggtttgaattaaaggtaggagataaagtccagagaaaagagatcctgcaaaat
ctcgttgaaatcctgttcgagcgaaatgatcttgagcttatgccaggacgcttcagggta
aaaggggatactattgacattattcccggatattttgataatattatccggattgagcta
ttcggagatgaggtagacaggatttccgaggtggacaaacagacaggacagcgaacagaa
gatatggattatttctttgtttatcctgccaggcactatgtaattcctgaagaggagcag
aaaagtgcaattcagtccattctcgaagagctcgaagaacaccttcctgagctagggctt
ctcgaatctcacaggttaaagcagcgcacgctttatgatatggaaatgattcaggaaacc
ggtagctgtaaaggtattgaaaattattcgcggcactttgaccacagacagccaggagaa
cagcccttctgcctgcttgactatttccctgaggatttcctgcttgtcattgatgagagc
caccagacaatcccgcaacttcacggcatgtacaatggggaccgctcaagaaagaagagc
cttgtagattatgggttcaggcttccaagtgcctacgataacaggcctctgaagttcgat
gagttcgagaagtacatgaaaaacgtgatttttgtttcggcaaccccagcagactatgaa
cgtgagcattcagcccagattgtggaacaaatcatccgcccgacagggcttgttgaccct
gaagtggaaattcgtcctcttgaaggccaggtcagggacgttatgcaggaggtcaggaaa
attgtcgaaaagggagaccgtgcccttgtaaccaccctgacaaaaaagcttgcggaagaa
cttaccgagtaccttgccagaaacgaaatcaaagctcgctacctgcactcggacattaaa
accatagaacggaccgaaataatccgcgaactccgccttggcaaattcgatgtccttgta
gggatcaacctgctcagggaagggcttgatattccggaagtgggtttcattggtatcctg
gatgcggataaggaaggtttcctgagaaactcaaaaagtctgattcagatcataggtcgt
gctgcccgaaacgccagctcgaaggttgtcctgtatgccgacaatatgacagattccatc
aaaagtgccgttactgaaaccgaacgccgtcgctccatgcagattgcctataataaggaa
cacggcatcgttccgacaactatcaggaaacccatcagggaaaaggtcgtggatatcacc
gacacaaaacacatccctaaaaccgacattcccaatatgattatcgaactggaaaccgaa
atgaaggaagctgctgacaggctggacttcgaaagggcaattcaagtaagggaaatgata
aagaagctggaaaaagagataaaagtagtctga
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