Methanosarcina barkeri 3: MSBR3_0417
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Entry
MSBR3_0417 CDS
T04533
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSBR3_0417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbak03400
]
MSBR3_0417
Enzymes [BR:
mbak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MSBR3_0417
DNA repair and recombination proteins [BR:
mbak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSBR3_0417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AKB80995
UniProt:
A0A0E3WVF2
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All DBs
Position
complement(562456..563232)
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AA seq
258 aa
AA seq
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MSGHYNLISWNVNGLRAAMKKGFLELLLEQKFDIVCIQETKVSPDKLPREAKNIPGYYNY
FVSAEQNGYSGVGLFSRKKPLKLETSMGLEKFDREGRFLRADFEDFTLMNIYFPNGKASL
ERLEYKLSFYEAFLDYANSLKAEGKRLVICGDVNTAHKELDLSRPKQNETISGFLPEERA
WMDKFLAAGYLDTFRMFHPEGGNYSWWSMRTGARKRNVGWRLDYFFVSENLQDNVKSSSI
YSEIMGSDHCPVGLELEF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcactacaacctcatttcctggaacgtaaacggtcttcgggctgcaatgaaa
aaaggttttcttgagcttttactggaacagaaattcgatatcgtctgcattcaggaaact
aaagtttctcctgataaactaccgagagaagcaaagaacattccaggctactataattat
tttgtctcggcagaacagaatggctacagcggggtcggactcttctccaggaaaaaacca
ctgaagctagaaaccagcatgggactcgaaaaatttgacagggaaggccgcttcctgcgt
gccgattttgaggactttaccctaatgaatatctattttcctaatggcaaagcctctctg
gagcgcctggaatacaaattgagtttttatgaagcttttttagactatgcaaactctctc
aaagccgaaggcaaaagacttgtcatttgcggagatgtcaatactgcccacaaagagctc
gacctctcccgtcccaagcaaaacgaaacaatatccggttttcttcctgaagagcgggca
tggatggataagttccttgctgccggctatcttgataccttccgtatgttccatcctgaa
ggcggaaactattcctggtggtcaatgagaacaggtgcacgtaaaagaaatgtcgggtgg
cgtctggactactttttcgtaagcgaaaacctgcaggacaatgtaaagtcctcctcaatt
tacagtgaaatcatgggctctgaccactgtcctgtagggcttgaactggaattttaa
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