Methanosarcina barkeri 3: MSBR3_0432
Help
Entry
MSBR3_0432 CDS
T04533
Name
(GenBank) tRNA pseudouridine 55 synthase Archaea
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbak03016
]
MSBR3_0432
Enzymes [BR:
mbak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSBR3_0432
Transfer RNA biogenesis [BR:
mbak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSBR3_0432
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
AKB81010
UniProt:
A0A0E3WUU3
LinkDB
All DBs
Position
578222..579517
Genome browser
AA seq
431 aa
AA seq
DB search
MDVLDISKKILHEGPICDNCLGRQFAKLSTGLSNRERGQSLKLALVLEGDRIYKAEKDDS
LLKELAPCSAFARKALGTEGEDEQCWVCLDQFKKLDEWADEAVKALEGLEYSTFLVGTKV
SGLLSENEEMLWAEAGTAYAEQLKTELNREVGKRIAEKVQKDVDFENPDITITLDLAKNK
LDLQLRSVYILGRYRKLLRGIPQTRWPCRKCKGKGCERCNFTGKQYQESVDELIKGPVTE
VFQAADTAFHGSGREDIDALMLGSGRPFVVEAKSPVKRSTDLEKLMQNINEKAAGKVEVR
ELSFTGKDMIETLKSSKADKTYKLKVTFKEPVSEEKLKSSLEALNGIEISQQTPKRVVHR
RADLVRKRHVHSIRLDELTDEGYAYITVNCEGGLYVKELISGDEGRTNPSLSGLLGVPAL
VEDLDVVNVDI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgtactcgatatttcaaaaaaaattctccatgaaggcccgatatgtgacaactgt
ctgggcaggcaatttgcaaaattatccacaggtctgagcaatagagaacgcgggcagtcc
ttgaaacttgcccttgtcctggaaggggatcggatctataaagctgaaaaagatgattcc
ctgcttaaagagcttgctccttgcagtgcatttgcgagaaaggctctcggaacagagggg
gaagacgaacagtgctgggtctgccttgaccagtttaaaaagctggatgaatgggccgat
gaagctgtaaaagctcttgaaggacttgaatattctacctttcttgttggtacaaaggtc
agcggacttctgagtgaaaacgaggaaatgctctgggctgaggcaggaactgcatacgcc
gagcagcttaagaccgaacttaatagggaagttggcaagcggatagctgaaaaggtccag
aaagatgtggatttcgaaaaccctgatattacaattacgcttgacctggcaaaaaacaag
cttgatctccagcttcgttcggtatatattctgggacgctaccgcaaacttctaagggga
attccccagacccgctggccttgcaggaaatgcaagggtaaaggatgtgaacgctgcaat
tttacagggaaacaatatcaggaatccgtagacgagcttataaaaggacctgtaactgaa
gttttccaggctgctgatacggcttttcatggttcgggcagggaagatatcgatgccctt
atgctgggaagcggtaggccttttgtagttgaagcaaagtcccctgtaaagcgaagcaca
gaccttgaaaaacttatgcaaaatattaacgagaaagctgccggaaaagttgaggtaaga
gaattatctttcactggaaaggatatgattgagaccttaaaaagctcaaaggcggataaa
acttataagcttaaagttacatttaaagagcctgtttcggaggaaaagcttaaatccagc
ctggaggctttgaatggcatagagatatcccagcagactccaaagcgggtagttcacagg
cgggctgaccttgtcaggaaaagacatgtgcacagtatcaggcttgacgaactgacagac
gaaggctacgcttacataacagtaaactgcgaaggtgggctgtatgtaaaagagcttatt
tccggagatgaaggaagaacaaaccctagcctgagcggacttttaggggttcctgcgctt
gtggaagatcttgatgtagtcaacgtcgatatttaa
DBGET
integrated database retrieval system
