Methanosarcina barkeri 3: MSBR3_0553
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Entry
MSBR3_0553 CDS
T04533
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBR3_0553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbak03019
]
MSBR3_0553
03009 Ribosome biogenesis [BR:
mbak03009
]
MSBR3_0553
04131 Membrane trafficking [BR:
mbak04131
]
MSBR3_0553
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbak04147
]
MSBR3_0553
Messenger RNA biogenesis [BR:
mbak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBR3_0553
Ribosome biogenesis [BR:
mbak03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBR3_0553
Membrane trafficking [BR:
mbak04131
]
SNARE
SNARE associated proteins
Others
MSBR3_0553
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBR3_0553
Exosome [BR:
mbak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBR3_0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
AAA_22
AAA_14
CDC48_2
TIP49
AAA_33
AAA_24
Parvo_NS1
AAA_28
ABC_tran
IstB_IS21
Mg_chelatase
RNA_helicase
nSTAND3
NACHT
Sigma54_activat
NPHP3_N
AAA_7
AAA_18
AAA_lid_PRS2_C
Vps4_C
AAA_25
ATPase_2
AAA_17
NB-ARC
ATPase
Zeta_toxin
PhoH
TsaE
SLFN-g3_helicase
DUF815
Sigma54_activ_2
ORC-CDC6-like
ResIII
KAP_NTPase
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKB81131
UniProt:
A0A0E3SIH0
LinkDB
All DBs
Position
complement(758377..760671)
Genome browser
AA seq
764 aa
AA seq
DB search
MTDNEKIAAKLKVAEADQRDVGKGIVRVDDSFREKLGLKPFDVIEIKGGKSTSALVGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKA
VFMNRTVSKGDFISTTSLRRSRERETFGKGIMFEDFFQDFFGPGMGQSFGLGEIKLQVIS
TSPSGIVKITDMTEVELLPEAAEVTPEQNVPTVMYEDLGGVKDAITKIREMIELPLKHPE
LFDRLGIDAPKGVLLYGPPGTGKTMLAKAVANESDAYFISVNGPEIMSKYYGESEKGIRD
VFEEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN
RPEAIDMALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRILPKINLNEPEIPSEILDTLRVTREDFENALKDVQPSAIREIL
IEIPNVSWEDVGGLEGVKQLLKEAVEWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESEANFITAKGSDLLSKWYGESEKRIAEVFSRARQVAPSIIFLDELDSLAPIRGA
SVGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
AGARKEIFKVQTSKMSLAEDVDIEKLVSMTDQYTGADIAAVCKKAGRDALREDLHAKEVK
QKHFLQAIAETGPSVTPDTMKYYHAVQSGLRKRQSKEIETPFYS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacaacgaaaaaatagctgcaaaactaaaagtcgcagaagctgatcaaagagac
gtcggaaaaggaattgtccgggtggatgacagtttccgggaaaagctgggccttaagcct
tttgacgttattgaaataaaaggaggaaaatcaacttcagccctggtagggcgtccgtat
cccagcgactcgggccttgatattatccgcatggatgggctcatccgtactaatgcaaaa
actagcataggggagtacgtggacattcgcaaagctgactggaaagaagcaaagagtgta
actcttgcgcctgtagctaagggcatgcagatttatgctccaagtgaaactcttaaagcc
gtattcatgaaccgtacggtttcgaagggtgattttatttccaccacaagcttgagacga
tcccgagagagggagacttttgggaaaggaattatgttcgaggatttctttcaggacttt
tttggtccaggtatgggacagtcatttgggctgggagaaataaagttacaggtgatctcc
acttccccgtctggaatagtaaagattacagatatgacagaggttgagctcctacccgaa
gctgcagaagtaacacctgaacagaatgttcccacagtcatgtatgaagatctgggtggg
gttaaagacgctatcaccaaaataagagaaatgatagaattacctttgaagcaccctgaa
ctttttgatagactgggaattgatgctccaaaaggagtactgctttacggaccgcctgga
acaggtaagacaatgcttgcaaaagcagttgcaaatgagtccgacgcctactttatctca
gtcaatggtccggaaattatgtccaagtactacggtgagtccgaaaaagggatcagagat
gtctttgaagaagcagagaaaaacgctcctgcaatcattttccttgatgaaatcgactcc
attgcacctaagagggctgaggtaaccggagaagttgaaaggagagttgtagctcaactc
ctctctctgatggacgggcttaaggctcgcaagaacgtgattgtgatagggtcaaccaac
cgtcctgaagcaattgatatggcacttcgccgccctggtagatttgatagagagattgaa
ttaagggttccggacactgaaggaaggctcgagatcttccagatccacacaagaggtatg
ccacttgccgaaaacgtaaatctcatggacttcgctcagataacttatgggttcgtggga
gctgacattgctgcactttgccgggaagctgcaatgagttccttgagacggattcttccg
aagattaacctcaatgaacctgaaattccaagtgagatccttgacacacttcgggtcaca
agggaagacttcgaaaacgccttgaaagatgtccagccatctgctataagagagatcctt
atcgaaattccgaatgtgagctgggaagatgtaggcggcctggaaggagtaaaacaactt
ttgaaggaggccgtggagtggccccttaaaagtccggagtcatacagggatataggagtt
gaggctcccaaaggagtacttttatatggtcctcctggtactggaaagactctccttgca
aaagctattgcccacgagtccgaagctaacttcattaccgcaaaaggaagcgatctgctt
tccaagtggtacggagagtcggaaaaaagaattgccgaggttttttcacgggcaaggcag
gttgctccttcaattattttcctggatgagcttgattctcttgcgccaattcggggagct
tccgttggtgagccacaggttacagccagaattctgaatcagctgctttccgagatggac
gggcttgaggaactcagagctgtagttgtaataggtgcaaccaatcgtcctgatattata
gatccggctcttctaaggcctggacgttttgacgagttaattctcgttcccgttccggat
gcgggagctaggaaggaaatttttaaggtccagacctctaaaatgtcgcttgcagaggat
gttgacattgaaaaactggtttccatgaccgatcagtatacaggtgctgacattgcagct
gtatgtaaaaaagcaggaagagacgcacttcgggaagaccttcatgctaaagaggtgaag
cagaaacacttccttcaagcgattgctgaaaccgggccttcggttactcctgataccatg
aagtattaccatgctgtacagagtggcctgagaaaaaggcagtcaaaagaaatagaaact
ccattttatagctga
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