Methanosarcina barkeri 3: MSBR3_0904
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Entry
MSBR3_0904 CDS
T04533
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSBR3_0904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbak03009
]
MSBR3_0904
Ribosome biogenesis [BR:
mbak03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSBR3_0904
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB81482
UniProt:
A0A0E3SKK8
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All DBs
Position
complement(1224022..1224720)
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AA seq
232 aa
AA seq
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MKMVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGEEVSLEDILAVETIFEDANRGDRA
AESDILNAFETTDPFKIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTKA
PHPPARIEKAMEEAKVHIDPLKSVDQLVNITMKAIRPLIPIRFEEISIAVKIPPEYAPKA
YGDISKIGNITKEEWQRDGSWIAVVRIPAGVQTDFYALINHLTKGEAQTKLL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatggtgtccctggacgaggcagtgactgcacggcttaagagaggcagtaaacac
ttcgaagttctggtcgagcccgaaggagctctggcctacaagcgaggagaagaagtaagc
cttgaagacattctggcagttgaaactatcttcgaagacgcaaaccgaggggaccgagca
gcagagtctgatattctcaatgcctttgagacaacggaccccttcaagattgctgccgtg
atcctgaaaagcggggagcttcagctcactgctgaacagagaaaacgcatgcttgaggaa
aaaaagaagaaagttatctataccatttccaggaatgcaataaacccccaaacaaaagca
cctcatcctcccgcacggatcgaaaaggcaatggaagaggcaaaggtgcacatagacccc
ttaaaaagcgtagatcagctggtcaatattacaatgaaagccattcgtccgcttatacct
atacgctttgaagagatcagtattgctgtgaaaatccctcccgaatatgctcccaaagca
tacggagatatttccaagataggaaatattacgaaagaagaatggcagcgtgacggctcc
tggattgcagtagtaagaattccggcaggagtccagactgatttttacgctcttataaat
catcttactaagggagaggctcaaactaaacttttataa
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