Methanosarcina barkeri 3: MSBR3_1411
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Entry
MSBR3_1411 CDS
T04533
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBR3_1411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbak03021
]
MSBR3_1411
Enzymes [BR:
mbak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBR3_1411
Transcription machinery [BR:
mbak03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBR3_1411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AKB81989
UniProt:
A0A0E3WVL8
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All DBs
Position
1903812..1905407
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AA seq
531 aa
AA seq
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MQHHIDSFNKFIDYGLQKIIDEQRIIETDIEDTYLKLGKIRVEHPVVKEADGAIEKLYPN
EARLRNLSYSGPLYLEMSVVKDGVESEVMEAKIGQLPIMIKSKICNLPGLSETEKIRYGE
DPLDPGGYFIIGGTERVVMTLEDLAPNKILVEYGERYGDTIEVAKVFSQKRGYRALVIVE
RGRKSLLEVSFPSISGRVFFITLMRALGIVTDEDIVNAVSSDPEIIKFMLENLEEAEVET
QEEAIEKIGARVAAGQAKEYQIKRANYVIDRYLFPHLGNDMRDRISKAHFLARMAESCFE
LALGKRSEDDKDHYANKRLKLAGDLMEDLFRVSFNRLARDIKYQLERANMRNRELNVATI
VRADVLTDRLQHPLATGNWVGGRTGVSQLLDRNDYISTLSHLRRVISPLSRAQPHFEARD
LHATQWGRLCPSETPEGPNCGLVKNFAEMVELSTGIEDTEGIKKILHDLNVERVVVKVPE
VPAKVRETLLDEFGEEIIEEYEEPSETESKYKDEEFYDYSDMDDAGSMFGD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaccatatagactcatttaacaagtttatagattacgggctgcaaaaaatcata
gatgaacagagaataatagaaaccgatatcgaggatacctacctcaaactaggcaagata
agggtagaacatcctgtggtaaaggaagccgacggggcaatcgaaaaactttatcccaac
gaagcgaggctcaggaacctctcgtactcaggtcctctatacctcgaaatgagcgtggta
aaggacggagttgagtccgaagtaatggaagcaaaaataggacagcttcccatcatgatc
aaatccaagatctgtaaccttccagggcttagcgagactgaaaaaatccgttatggtgaa
gacccgcttgatcccgggggatatttcattataggcggcaccgaaagagtggttatgacc
cttgaagacctcgctcctaacaaaattcttgtagaatatggggaaaggtacggtgacact
atagaggttgcgaaggttttctcacaaaaacgcggatacagagcccttgtaatcgtagaa
agaggaagaaaatccctgctcgaagtttccttcccttcgatttcaggccgcgtgttcttt
attacccttatgagagcccttgggatcgtaactgacgaagacattgtaaatgcagtttca
agtgatcccgaaattattaaattcatgctggagaaccttgaggaagccgaagtcgaaacc
caggaagaagcaatcgagaaaatcggggccagggttgctgcaggtcaggctaaagaatac
cagataaaaagagcaaactatgttattgacaggtacctcttcccccatcttggaaatgac
atgagagacaggatctccaaagctcacttcctggcaagaatggctgagtcatgtttcgaa
ctggcccttggcaagcgttcggaagacgacaaagaccactatgcaaataaaaggctgaaa
cttgcaggagacttgatggaagatctcttcagggtatcattcaacagacttgcaagagac
ataaaataccagctcgaacgcgcaaacatgagaaatcgagaacttaacgttgctacaata
gtcagggctgacgtactgactgaccgcttgcaacaccctctggcaaccggaaactgggtt
ggaggaagaacaggtgtgtctcagctccttgacagaaacgactacatctctactctttcc
catctgcgccgggtaatttcacccctttcacgagcccagcctcactttgaggccagagac
ctgcacgcaactcaatggggaaggctctgtccatcggaaactcctgaaggcccaaactgt
ggcctggtgaaaaattttgccgagatggttgaactttcaacaggtatagaagataccgaa
gggataaagaaaatcctccacgacttaaacgtcgaacgtgtggttgtaaaggtacctgaa
gtcccggccaaagtgagagaaaccttacttgatgaattcggagaagagattattgaagaa
tatgaagagccttcggaaaccgaaagcaaatacaaagatgaagagttttacgattattca
gacatggacgatgccggatcaatgttcggtgattga
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