Methanosarcina barkeri 3: MSBR3_1413
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Entry
MSBR3_1413 CDS
T04533
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBR3_1413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbak03021
]
MSBR3_1413
Enzymes [BR:
mbak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBR3_1413
Transcription machinery [BR:
mbak03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBR3_1413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AKB81991
UniProt:
A0A0E3SJZ1
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All DBs
Position
1907249..1909891
Genome browser
AA seq
880 aa
AA seq
DB search
MANVPPIPKRIASIKFGLLSPKEIRKMSSTPIITADTYDDDGFPIDMGLMDTRLGVIDPG
LRCKTCSGRAGECPGHFGHIELVAPVVHVGFNKVIRKLLRATCRKCSRLLLDPAQKQHFL
DQLTGIEEIGHMPDDLINEVYKEASKVKTCPYCNEEQLEIKFEKPSEYLENGEKLTPTEI
RDRFENVPDDDIRVIGMDPKNARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLV
DIIRINQRFQENREAGAPQLIIEDLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQ
RLKGKEGRFRGSLSGKRVNFSARTVISPDPNLSINEVGVPMPIARTLTMPSVVTPRNIEQ
LKVYVRNGEDVHPGANYVLRPDGRRIKVTNVNKDDLAEKLEFGWVVERQLKDGDIVLFNR
QPSLHKMSIMAHSVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHALQTEESRAEAKVLMQ
VQENILSPRFGGPIIGGIHDHISGLFLLTRFENHILANDAYDMLRKSDIKELPSPAGYDS
DGKPYWTGKQIFSQILPKNLNAQFAAQVCSHCDTCKKEECPNDAYVVIRDGELIAGTIDE
AAIGAFKGKVQDRIIKEIGPEAGSRFIDNMTMLAVRAIMRTGLSFGIADEDIPKEARIQI
NEVLNKAEDAVQNLIKSYQNKELEPLPGRTLDETIEMSIMQKLGKARDETGNIADSHMGL
ENPAVIMARSGARGSILNLTQMAACVGQQAVRGERIRRGYAGRTLPHFQKGDLGSDAHGF
VKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDT
RGVLVQFKFGEDGINPTKSDFSKPDTIHRIVDSVAKREVA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtacctcctattccgaaaagaattgcttctattaaattcggactactgtct
ccgaaagagatccgtaaaatgagttcgaccccgatcatcacagccgatacttacgatgat
gacgggtttccaattgacatgggacttatggacacaagactcggagtcattgaccccggt
cttcgctgcaagacctgttcagggagagcaggcgagtgtcccggacacttcgggcatatt
gagcttgtagctccggtagttcatgttggttttaataaagtaatccgaaaactactcagg
gcaacctgcaggaaatgcagcaggctcttgcttgaccctgcacagaaacagcactttctg
gaccagcttacaggcattgaggaaatcggacatatgcctgatgacctgattaacgaggtt
tataaagaggccagtaaagtaaagacctgtccctactgcaatgaggaacagctggaaatt
aaatttgaaaaacccagcgaatatctcgaaaacggggagaaattaacacctaccgagata
agggatcgttttgagaatgtccctgatgacgatattcgggttatcggaatggacccaaag
aacgcaaggcctgaatggatgatccttacggttctacccgtacctcctgttacggttcgt
ccttcgattacccttgaatccgggcagcgcagtgaagacgacctgacccataaactcgta
gatattatcagaattaaccagcgcttccaggaaaacagggaagctggcgctcctcagctt
attattgaggacctctgggagctccttcagtatcacgttacaaccttctttgacaattca
gtctcaggaatacctcctgcaagacacaggtcaggaaggcccttaaagactctatcccag
cgtttgaagggtaaagaaggacgtttcagaggaagtctgtcaggtaagcgtgttaacttc
tctgcacgtacggtaatctctccggatccgaacctgagcattaacgaggtcggggttcca
atgcctattgcacggaccctgacaatgccctcagtagtaacaccaaggaatatagaacag
cttaaggtctacgtgcgtaacggagaggatgtgcaccccggtgcaaattacgtactgcgt
cctgacggcagacgtataaaagttacaaatgtaaacaaagacgaccttgcagaaaagctg
gaattcggatgggtagtggaacgccagttaaaggacggagatattgtactttttaacagg
cagccatctctacacaagatgagtattatggctcattccgtgaaagtacttccgaataag
accttcaggctgaaccctgccgtatgccctccatataacgctgactttgatggggacgag
atgaacatgcatgcccttcagaccgaagagtccagggctgaggcaaaagtcctgatgcag
gttcaggaaaatattctttccccgcgtttcggaggtcctattataggtgggatccatgac
catatttcagggcttttcctgctgacacgttttgagaatcatatcttagccaatgatgcc
tacgatatgctccggaaaagtgatattaaggagttgccttcccctgcagggtacgattcc
gacggaaagccttactggacaggaaaacaaatcttcagccagattttgcctaaaaatctt
aatgcacagttcgcagcccaggtctgctcgcactgcgatacctgtaagaaagaggaatgt
ccgaacgatgcctatgtggtaatccgggacggagaacttattgcaggtacaatagatgag
gcagctatcggagcattcaaaggaaaagttcaggaccgtattatcaaggaaataggccct
gaagccggatctcgttttatagacaatatgaccatgctcgcagttagggcgatcatgcgg
acaggcctgagtttcggaatagctgatgaagatattccgaaagaagcaaggattcagatc
aatgaagttctcaataaagctgaagatgctgtgcaaaacctcatcaagtcttaccagaat
aaggagcttgaacctcttcctggaagaacccttgatgagacaattgaaatgagcattatg
cagaagctcggaaaggccagagacgagaccggtaacatagcagacagccatatggggctt
gaaaacccggcagttatcatggctcgttcaggagccagaggttccatcctgaaccttact
cagatggcagcctgtgttggacagcaggccgtgcgtggagaacgtatccgcagaggatat
gcaggcaggacactcccccatttccagaaaggagatcttggttcggatgcccacggattc
gtaaaggcaagctacaagagcggacttaacccaactgaatatttcttccatgcaatcggt
ggtagggaaggtcttgtggacactgcagtcaggacttcacaatcagggtacctgcagaga
aggcttgttaatgctctacaggatctggaagtccagtatgaccttacagtcagggatacc
agaggggtgcttgtacagttcaaatttggagaagacggaattaaccccacaaagagcgac
ttcagtaaaccggatacgatccacaggattgtcgattccgtagcaaagcgggaggtggcc
tga
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