Methanosarcina barkeri 3: MSBR3_1459
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Entry
MSBR3_1459 CDS
T04533
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbak03400
]
MSBR3_1459
Enzymes [BR:
mbak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSBR3_1459
DNA repair and recombination proteins [BR:
mbak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSBR3_1459
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
ResIII
Helicase_C
DEXQc_Suv3
HTH_61
IMS_HHH_1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AKB82037
UniProt:
A0A0E3SLG8
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All DBs
Position
complement(1966877..1969066)
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AA seq
729 aa
AA seq
DB search
MKIESLDLPDEVKRFYLDSGILELYPPQAEAVEKGLLEGRNLLAAIPTASGKTLLAELAM
LKSILAGGKALYIVPLRALASEKFKRFREFSELGIRVGISTGDYDLRDEGLGVNDIIVAT
SEKTDSLLRNETIWMQEISVVVADEVHLIDSPDRGPTLEVTLAKLRKMNPSCQILALSAT
VGNADELAAWLEAELVVSEWRPTELLEGVFFNGTFYCEDREKSIEQSTKDEAVNLVLDTL
KKDGQCLVFESSRKNCMAFAKKATSTVKKTLSTENRKILAEIADEILEISDTDTSTNLAA
CVRSGTAFHHAGLTTPLREIVEDGFRAGKIKLISSTPTLAAGLNLPARRVIIRSYRRYSS
EDGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLVAKSYNEFVFLFENYIKAEAEDIWSKLG
TENALRTHVLSTISNGFARTYDELIDFLEATFFAFQYSNFGLSTVVNECLNFLRQEGMLE
KTDALIPTSFGRLVSRLYIDPLSAARIAKGLKEAKSLSELTLLHLVCSTPDMRLLYMRNH
DYQDINDYVMAHASEFVKVPSSFDATEYEWFLGEVKTSLLLLDWVHEKSENEICLKFGTG
EGDIHAIADIAEWIMHVTAQLAGLLDLKGAKEATELEKRIHYGAAPELMDLLDIRGIGRV
RARRLYEAGFSSSAELAGADLEKVAALLGPKIADRIFRQIEGRDAVPQIVESEHPEKSSS
SGQKTINDY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagtctcgatctgcccgatgaagtaaaacggttttatctcgattccgga
attctggaactttatcctcctcaggccgaagcagtggaaaaagggttgcttgaaggaaga
aacctgcttgctgcaatcccaacggcttcagggaaaacactccttgccgaacttgcaatg
ttgaagtccatcttagcaggaggaaaggcactctatatcgtacctctcagagctcttgct
tccgaaaaattcaagcggtttagggagttttcggaacttggaattcgggtcgggatatct
acaggtgactatgacttgcgggatgaaggactcggagtaaacgacattattgtggcaacc
tccgagaaaaccgattcactgctaagaaacgaaaccatctggatgcaggaaatttcggtt
gttgtggcagatgaggtgcacctcatagattcaccggataggggtccaacgcttgaggtc
actcttgcaaagcttcggaaaatgaatccttcctgccagattctggcgctgtctgcaact
gtcgggaatgccgatgaacttgcagcctggctggaagccgagcttgtagtaagtgaatgg
agacctaccgagctcctcgaaggggtattctttaatgggactttctactgcgaagacagg
gaaaaaagtattgagcagtccacaaaagatgaagccgtgaaccttgtgctggatactctc
aaaaaagatggtcagtgcctggttttcgaaagcagtagaaaaaattgtatggcttttgca
aaaaaggcgacttcaactgttaaaaagacactttctacagaaaacaggaaaatccttgca
gaaatcgcagatgaaatcctggaaatcagtgacactgatacttcaacgaaccttgcagcc
tgtgtccgttcggggacagcttttcatcatgcgggtcttaccacgcctttaagggaaatt
gtagaggatggtttcagggctggaaagatcaagttaatttcaagcacgcctactctagca
gccggactcaacctgcctgcacgacgtgtaattatacgaagttatcggcgttattcttct
gaagacggaatgcagcctattcctgtgctcgagtataaacagatggcaggcagggcaggc
agaccaaggcttgatccatacggagaggcggtacttgttgcaaaatcatataatgaattt
gttttcctttttgagaactacataaaggccgaagccgaagatatctggtccaaactcgga
accgaaaatgctctcaggactcatgtgctctctacaatttccaacggttttgcgaggaca
tatgatgaactaattgactttctggaggcaacgtttttcgctttccaatactcgaacttc
gggctttccacggttgtgaacgaatgccttaactttttgcgtcaggaaggaatgcttgaa
aaaaccgatgcccttattcctacaagcttcggaagacttgtttcaaggctctatatcgac
cctctttcagctgctcgcattgcaaagggcctgaaagaagcaaagagcctgagtgagctt
accctacttcatctggtgtgcagcacacctgacatgcgccttctatacatgcggaaccat
gattatcaggatatcaatgattatgtaatggctcatgcaagcgagtttgtaaaggtgcca
agttctttcgacgctacagaatatgaatggttcctgggagaagtcaaaacttctctcctt
ctgcttgactgggtccatgaaaagtctgaaaatgagatttgcttgaagttcggtaccggg
gaaggtgacattcatgcaattgcggatattgcggaatggataatgcatgttaccgctcag
cttgcagggctccttgacctgaaaggtgcaaaagaagccacagaacttgaaaaaaggatt
cattacggagcagcccccgaacttatggacctgctcgatatcagaggtatagggcgcgtg
agagcaagaagactttatgaggcaggtttcagttcctcagcagagcttgcaggagctgac
cttgagaaagtagcagctcttctcgggccgaaaattgcagaccggatttttaggcagatt
gagggcagggatgcagtccctcaaattgttgagtctgaacatcctgagaaaagttcttct
tcagggcaaaagacaattaacgattattga
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