Methanosarcina barkeri 3: MSBR3_1475
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Entry
MSBR3_1475 CDS
T04533
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBR3_1475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbak03019
]
MSBR3_1475
03009 Ribosome biogenesis [BR:
mbak03009
]
MSBR3_1475
04131 Membrane trafficking [BR:
mbak04131
]
MSBR3_1475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbak04147
]
MSBR3_1475
Messenger RNA biogenesis [BR:
mbak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBR3_1475
Ribosome biogenesis [BR:
mbak03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBR3_1475
Membrane trafficking [BR:
mbak04131
]
SNARE
SNARE associated proteins
Others
MSBR3_1475
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBR3_1475
Exosome [BR:
mbak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBR3_1475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
AAA_33
AAA_25
IstB_IS21
AAA_28
AAA_18
nSTAND3
AAA_7
RNA_helicase
Mg_chelatase
Sigma54_activat
ATPase
Parvo_NS1
NPHP3_N
AAA_24
AAA_17
DUF815
ABC_tran
bpMoxR
Zeta_toxin
NB-ARC
SLFN-g3_helicase
PhoH
Vps4_C
AAA_lid_PRS2_C
MlrA_helical
Motif
Other DBs
NCBI-ProteinID:
AKB82053
UniProt:
A0A0E3SMD8
LinkDB
All DBs
Position
1989693..1992020
Genome browser
AA seq
775 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTTLLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWD
QGLVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLVLALPESMTQGGPELQFGEHANEII
KRHILKRPVFRGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLVTEATLIELR
KKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIELPMKHPELFGHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMVERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIERDEETEEIGKAETEVDEATLERERKEKADKYLMYL
AERTQGFVGADLLALVQEAAMRCLRENLPDLDLEKEAIPPERLEKIVVTKKNFEDALTEA
EPSALREIYVEMPTVGWNDVGGLDEAKQSIIEAVEWPIRNPEKFIHMGIKAPRGILLYGP
PGTGKTLIAKAVSKESNANFISVKGPEIFSKWLGESEKAIRETFRKARQVAPCVIFFDEI
DSIASMPGMESTDSRTSERVLNQLLTEMDGLESLRDVVVIAATNRPNLLDPAILRPGRFD
RLVFIGSPDWKGRLKIFRIHTKDTPLAEDVNLETLANETEGYVGADIESVCREAVMIALR
ENFDIESVEMRHFREALKKVKPTITENIAQFYEKIEAQFKGGQRLTDTSGYIGYR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaagcatatcctatcgaccttggaagaggaatt
atccgacttgaccctacaactttgctgaagcttcagctctcgccaggcgacatcgtggaa
ataagaggtaagaaaaagaccacggcaaaggtgtggagagctgacaggcaggactgggac
cagggactcgtgagaattgataacttcatccggcaaaatgcaggagtttccataggagag
aaggtaaccatcaaaaaggttgaagccccggaagcaaaaaagcttgttctggcgcttcct
gaaagcatgacacaggggggacctgaacttcagttcggggaacatgcaaatgaaatcata
aaaaggcatattctcaaaagaccagttttcaggggagacataattcctataataaattca
atgtctcaaccaatgacagaatcccttactacaagccaggtaattcctctggttgctgtt
gagactgatcctgcaaatacaattgtccttgttacggaagcaacacttatcgaactgcgt
aaaaagccggtgcagggatacgaaaaagcaacccgaggcgtaactacctatgaagacata
ggaggcctcggggatgaaattatgcgtgtccgggaaatgatagagctgcccatgaagcat
ccagaacttttcggccacctgaatatcgaacctccgaaaggagtcattctctatggccca
cccggaaccgggaaaaccctgattgcaaaagccgtagccaatgaatcaggagcaagtttc
cattatattgcaggccctgaaatcgtagggaaattctatggagaaagtgaagaaaggctc
aggaagatcttcgaagaagcaactcaggatgctccatcggtcattttcattgatgaaatc
gactctattgctccaaaaagagagaatgtaacaggagaagtggaaagacgtgtggttgcc
cagctcctgaccctgcttgatggaatggtagaaagagggcaggttgtggttataggagcc
acaaaccgtgtggatgcgattgatccggcactcagaagaccaggccgttttgacagggaa
atacatatcggtgtgcctgataccaaggacaggtatgaaatcctgcagatccataccagg
ggcatgcctatagaaagagatgaggaaactgaggagatcggaaaagccgaaaccgaagta
gatgaggctaccctggagagggagagaaaagaaaaagcagacaaatacctgatgtatctg
gctgaaagaacccagggatttgtaggtgcagatctgctggctctcgtgcaggaggctgcc
atgcggtgcctcagggaaaatctgcctgaccttgaccttgaaaaggaagcaattccacct
gagaggctggaaaaaatcgttgtaaccaagaaaaactttgaagatgcactgactgaggca
gaaccttcggctcttagagaaatttatgtagaaatgcccacagttggatggaatgatgtg
ggagggctcgatgaagcaaagcagtccattattgaggctgtggaatggcccatcagaaat
ccggaaaagttcattcacatgggcataaaagctccaagaggaatcctgctttacggtcct
ccaggaaccggaaagaccctgatagccaaggctgtttccaaggagtcaaatgcaaacttc
ataagcgtcaaagggcctgagattttctcaaagtggcttggagaatcggaaaaagctata
cgtgaaaccttcaggaaagccaggcaggtcgctccctgtgtgattttctttgacgaaatt
gattcgattgcttctatgccaggaatggaatccacggacagccgcacttcagagagagtg
cttaaccagctcctgaccgagatggatgggcttgaatccctaagagatgtggtagttatt
gccgcaaccaatcgtcctaatctgctggaccctgcaattctgcgtccaggacgctttgac
aggctggttttcattggttctcctgactggaaaggcaggctcaagatcttcaggatccat
acaaaagacacaccccttgctgaagatgtgaaccttgaaacccttgcaaatgaaactgag
ggttacgtaggtgccgatatcgaatccgtgtgtagggaagccgtaatgattgccctgagg
gagaacttcgatatagaatctgtagaaatgagacacttcagggaagctctgaagaaggta
aaacccactattacggaaaatattgctcagttctacgaaaaaatcgaggcacagttcaaa
ggaggccagaggctcacagatacatctggatacatcggttacaggtaa
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