KEGG   Methanosarcina barkeri 3: MSBR3_2315
Entry
MSBR3_2315        CDS       T04533                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mbak  Methanosarcina barkeri 3
Pathway
mbak03030  DNA replication
mbak03410  Base excision repair
mbak03420  Nucleotide excision repair
mbak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mbak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSBR3_2315
   03410 Base excision repair
    MSBR3_2315
   03420 Nucleotide excision repair
    MSBR3_2315
   03430 Mismatch repair
    MSBR3_2315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbak03032]
    MSBR3_2315
   03400 DNA repair and recombination proteins [BR:mbak03400]
    MSBR3_2315
DNA replication proteins [BR:mbak03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSBR3_2315
DNA repair and recombination proteins [BR:mbak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSBR3_2315
   MMR (mismatch excision repair)
    Other MMR factors
     MSBR3_2315
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSBR3_2315
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 RhaB_D2
Other DBs
NCBI-ProteinID: AKB82893
UniProt: A0A0E3SNP6
LinkDB
Position
3071008..3071745
AA seq 245 aa
MFKAAINAELLKDAVAALAVIVDEVRFRIKPEGISVKAVDPANVAMGIFELGSSAFDEYN
ADECEIGVDLNKITDLLGIADKNDTVQMELEEGNHKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGKDFPMLIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaaggcagcaattaatgcagagcttctgaaagacgcggttgccgcactagctgta
attgtagatgaggtcagattcaggataaaaccagaaggtatttcggtaaaagccgttgat
cctgctaacgttgcaatgggaattttcgagcttgggtcatctgctttcgatgagtataac
gctgatgagtgtgaaatcggagtcgacctgaataagattacggacctgctgggaattgcg
gacaagaacgacacagtccagatggaacttgaagaaggaaatcacaaactcctgattgat
gtcggagggctgtcttatacactttctcttctcgatccttctacaattcgagcagaacca
agagtcccacagctcgaattacctgctaaagttgttcttaacggtgcagacctcagacgt
gctgttaaagctgccgaaaaaataagcgaccatatgctcatgggagtttctgacgacaca
ttttatatggaagcaaaaggcgatactgatcaggttcgtctcgagatgggcagagatcag
ctaatcgacctgaaagcaggtgaagcatgttctcttttctctctggattatctgaccgat
atagtcaaacccacaaacaaagtcaatgaagttactctctcccttggaaaagacttccca
atgcttatagattttgaaattgcaaacggtgcaggaaggatttcttacctcctggctcca
agaattgagtcggactga

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