Methanosarcina barkeri 3: MSBR3_2349
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Entry
MSBR3_2349 CDS
T04533
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak00630
Glyoxylate and dicarboxylate metabolism
mbak00710
Carbon fixation by Calvin cycle
mbak01100
Metabolic pathways
mbak01110
Biosynthesis of secondary metabolites
mbak01120
Microbial metabolism in diverse environments
mbak01200
Carbon metabolism
Module
mbak_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSBR3_2349
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MSBR3_2349
Enzymes [BR:
mbak01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSBR3_2349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB82927
UniProt:
A0A0E3SN11
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All DBs
Position
complement(3110957..3112243)
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AA seq
428 aa
AA seq
DB search
MRRDYIDTGYSPKDTDLICEFHIEPSAGVNFEEAATHMAGESSIDSWTEISTLSPELAAR
LKPHVFYVNEDAQTVRVAYSEELFELGSVPQVLSAVAGNILSMKVVDNLRLQDIAFPGSM
LHEFKGPKFGLPGIRELTGVQDRPLIGTIVKPKVGLTSEKHAEVAYKSFAGGCDLVKDDE
NLTDQKFNGFEKRAELTLKLAEKAESETGERKMYLCNITAPTCKEMIRRMNILKDLGASY
AMIDIVPAGWTALQTLREEADDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDNVPADENQHILAQNWGRLKPMFPVASGGLAPT
MIPDLYTIFGKDVIMQFGGGIHAHPMGTAAGATACRQALEATLEGVSLQEYAKSHRELEV
AIDKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagggattatatagacacgggctacagcccaaaggataccgatcttatatgtgag
ttccacatcgaaccgtcagcaggagtgaattttgaggaagctgcaactcatatggcaggt
gaaagctctatagactcctggactgaaatttcaacgctaagtcccgaacttgcagccagg
ttaaagccccatgtcttttacgtgaatgaagatgcgcagactgtaagggtagcttattcg
gaagagctctttgaactcgggtcggtcccgcaggtactcagtgcggtcgcgggaaatatc
ctgagtatgaaagtagttgacaatcttaggctgcaggatattgctttccctggttcgatg
cttcatgaatttaaaggacctaagttcggattgccaggaataagggaacttacaggagtt
caggacaggcctctcataggaactattgtcaagccgaaagttggattaacctccgaaaaa
cacgctgaggttgcttacaaatcctttgcaggaggttgcgaccttgtgaaagacgatgag
aaccttacggatcagaagtttaatggctttgaaaaaagagctgaacttacactgaagctt
gcagaaaaggcagaatctgagacaggagagcgtaaaatgtatctctgcaacattactgcc
cctacctgtaaggaaatgatccgccgcatgaatatccttaaagacctgggtgccagctat
gcgatgattgacatcgtacctgcaggctggactgcgcttcagaccctgagggaagaagca
gacgatgcgggacttgctctccatgctcaccgatgcatgcattcagcctatactcggaat
ccacgccacggtataagcatgcttgtggttgccaagctctgcaggttgatcgggcttgac
cagcttcacataggtacggttgtaggaaaaatgcacggagaaaaacacgaggttctatct
cttcgtgacgaatgtgtgctagacaatgtgcctgcggatgaaaaccagcatattcttgcc
cagaactggggaagattgaaacccatgttccctgttgcatctggagggcttgctcctact
atgattcctgacctgtacaccatcttcgggaaggatgttattatgcagtttggtggcgga
attcacgcccatccaatgggcacggcagccggggccactgcttgcaggcaggcacttgaa
gcaactcttgaaggagttagcctgcaagaatatgcgaaaagccacagagaacttgaggtt
gccatcgataaatggctgaaaaaataa
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