Methanosarcina barkeri 3: MSBR3_2355
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Entry
MSBR3_2355 CDS
T04533
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBR3_2355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbak03019
]
MSBR3_2355
03009 Ribosome biogenesis [BR:
mbak03009
]
MSBR3_2355
04131 Membrane trafficking [BR:
mbak04131
]
MSBR3_2355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbak04147
]
MSBR3_2355
Messenger RNA biogenesis [BR:
mbak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBR3_2355
Ribosome biogenesis [BR:
mbak03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBR3_2355
Membrane trafficking [BR:
mbak04131
]
SNARE
SNARE associated proteins
Others
MSBR3_2355
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBR3_2355
Exosome [BR:
mbak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBR3_2355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
AAA_28
nSTAND3
Vps4_C
ABC_tran
Sigma54_activat
AAA_3
Mg_chelatase
AAA_17
AAA_18
AAA_7
NPHP3_N
IstB_IS21
RNA_helicase
Zeta_toxin
ATP-synt_ab
TsaE
AAA_24
DUF815
NB-ARC
Parvo_NS1
PhoH
AAA_30
AAA_11
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AKB82933
UniProt:
A0A0E3SNQ6
LinkDB
All DBs
Position
complement(3121264..3123531)
Genome browser
AA seq
755 aa
AA seq
DB search
MIEETNLRVAEAYHKDVGRGIARIDTRLMQQMGLVSGDIIEISGRAKTYAIVWPNVEREQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTDIVIKEKSVEEIRVPEGISYEDIGG
LKREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFEEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVVAQL
LSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRKQILLIHTRGM
PIQEDVSLGEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEEEIPQEILDKLVVT
KDDFKEALKNIEPSAMREVYVEVPHVGWEDIGGLENAKQELIEAVEWPLKYPEIFNTISV
KPPRGILLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRETFRKAKQ
AAPTVVFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVD
PALLRPGRFDRLIYVKLPDRTSRERIFEIHTQGKPIAEDVNLSELADLTEGYVGADIEGI
CREAAMLALREIVTPGIGRKDIEKRAGEIRISKKHFEHAIRRVKPTTSRENLTTYERSAE
LFAKYATEFEEEAPEAEEPEKEIEHENVPGFFQAQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaaactaacttgagagtcgctgaagcttatcataaggatgtgggcagggga
attgcaagaattgacacccgcttgatgcagcagatggggcttgtaagcggggatataatt
gagatatcagggagagccaagacttacgcaattgtctggccaaatgtggagcgtgaacag
gaaaatcggattcggatcgacgggaaccttcgcagtaatgccaaagttgggattgatgat
agggtcacaatccagaaagtccaggcaaaacatgcccaaagagttacccttgctccttct
caacctgtaagactcgttggaggggctcactacatcctcagaattattgagggaagacct
ttgaacaaaggtcagcagattagagtggaaactgtaaataaccctttgactttcgtagtt
gcatctacaagacctgccggacctgttgttgttactaaagatactgatatagtcattaag
gaaaaatctgtggaggagatccgggttccagaaggcatttcatatgaggatatcggtggg
cttaaacgggaaattcaacttgtcagagaaatgattgagttgccgctgagacatcccgaa
ctctttcagaagcttggaattgaacctcccaaaggagttctgcttcatgggcctccaggc
acgggtaaaacactgatcgcaaaggcagttgcgagtgaaaccgatgcaaatttcataact
attagtggccctgaaatcgtttccaagtattatggagagagcgagcagaagcttcgcgaa
attttcgaagaagccgaaaaagacgcaccttctatcatcttcatagatgagattgactcc
atagctcccaaacgcggtgaagttacaggagaaatggaacgcagggtagttgctcagttg
ctctccctcatggacgggctaaaatccagaggtgaggtagttgtaatcgctgccacaaac
cgccctaactcaatagatgaagctctccgccgtggtggaagatttgacagggaaatagaa
atcggaattcctgatcgtaatggtaggaaacagattcttctcattcatactagaggtatg
cctattcaggaggatgtaagtcttggtgaaattgcagatgtaactcacgggtttgtaggc
gctgatctgtcttctctctgtaaagaagctgcaatgcatgctcttagaaggataactcct
gaaatcgatatcgaagaagaagaaattccacaggagattcttgataagctcgtagtcacc
aaagatgatttcaaggaagctctgaagaatatcgagccttcggcgatgagggaagtttat
gttgaggtacctcatgtaggatgggaggatattggaggacttgaaaatgcaaaacaggaa
cttattgaggctgtagagtggccactgaagtaccctgaaatctttaacactatcagtgta
aaacctcctagaggaatactactgttcgggcctccaggtacgggtaaaaccctgcttgca
aaagctgttgcaagtgaaagcgaagccaatttcatcagcattaaaggtccggagctgctt
agcaagtatgtgggagagtccgagcgtgcggttagggaaactttcaggaaagccaaacaa
gctgcaccgacggtggtcttctttgacgagatcgattcaattgctccccaaagaagttct
gtttcagatacgcatgtgtccgaaagagttgtcagtcagatccttaccgaacttgatgga
gtagaggagctcaaggacgtaattattgttgcggccacgaatcggcctgatatggtagat
cctgcgcttcttaggcctggccgttttgataggcttatctatgtcaagctgcctgataga
acaagcagggaaaggatctttgagatccatacacagggaaaacccattgcagaagatgta
aatctctccgaactcgctgatttgactgaagggtatgtgggtgcggatatcgagggcatt
tgcagggaagctgcaatgctggcattgagggaaatcgttactccaggaattggcagaaaa
gacatcgagaaacgggcaggagaaatcaggatttcaaagaagcactttgaacatgcaatc
cgccgcgtaaagcctacaacatccagggaaaaccttacgacttatgaacggagtgctgaa
ctctttgctaaatacgcaactgaatttgaagaagaagctcccgaggctgaagaaccggaa
aaagaaatcgaacacgaaaatgttccgggtttcttccaggctcagtaa
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