Methanosarcina barkeri 3: MSBR3_2452
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Entry
MSBR3_2452 CDS
T04533
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBR3_2452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbak03019
]
MSBR3_2452
03009 Ribosome biogenesis [BR:
mbak03009
]
MSBR3_2452
04131 Membrane trafficking [BR:
mbak04131
]
MSBR3_2452
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbak04147
]
MSBR3_2452
Messenger RNA biogenesis [BR:
mbak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBR3_2452
Ribosome biogenesis [BR:
mbak03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBR3_2452
Membrane trafficking [BR:
mbak04131
]
SNARE
SNARE associated proteins
Others
MSBR3_2452
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBR3_2452
Exosome [BR:
mbak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBR3_2452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
NACHT
CDC48_2
nSTAND3
NPHP3_N
Mg_chelatase
IstB_IS21
Sigma54_activat
Parvo_NS1
RNA_helicase
ABC_tran
AAA_28
AAA_lid_PRS2_C
AAA_24
AAA_7
AAA_18
NB-ARC
Vps4_C
ATPase
TsaE
Zeta_toxin
AAA_11
AAA_17
PhoH
AAA_3
ORC-CDC6-like
AAA_25
AAA_19
SLFN-g3_helicase
Sigma54_activ_2
DUF815
AAA_30
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKB83030
UniProt:
A0A0E3WXI2
LinkDB
All DBs
Position
complement(3256128..3258422)
Genome browser
AA seq
764 aa
AA seq
DB search
MTDTEKTTIKLKVAESDQRDVGKGIVRIGENFRERLDLNPFDVVEIRGGKSTSALIGRLY
PSDSGLEIIRMDGLIRTNAKTSIGEHVNIRKAEWKEAKSVTLAPVAKGMQIYAPSETLKA
IFMNRTVSKGDFISTTSLRKLKETETFGKEVMFEDFFQDFFGEGFVPSFGLGEIKLQVVS
TFPSGIVKITDFTQVELLPEAIEVTPEHNISTVMYEDLGGLKEAIGKVREMIELPLKHPE
LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE
IFENAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKVRKNVIVIGSTN
RPEALDIALRRPGRFDREIELRVPDTDGRLEIFQIHTRGMPLAEDVNLMDFAQITYGFVG
ADIAALCREAAMSALRWVLPKIDLNEPEIPVEILDSLQVTREDFENALKDVRPSAIREIL
IEVPAVSWDDIGGLEELKKLLKEVVEWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFIAAKGSDLLSKWYGESEKRISEVFTRARQVAPSIIFLDELDSLAPVRGA
YAGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILVPVPD
EGARMEIFKVHTEKMTLSEDVDLEKLVSMTNQYTGADIAAVCKKAGRLALREDLHAKEVK
QKHFLKAATETSPSVTSDTMKYYEAIKGELRTRKSKEIENLSYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgacggatacggaaaagacaacgataaaattaaaagttgcagaatccgatcaacgggat
gttggaaaaggcattgtccgaataggtgaaaatttcagggaaaggctggacctcaatccc
tttgatgttgtggaaataagagggggaaaatcgacttcagccctcataggacgcctatac
ccaagtgattcgggacttgagattatacgtatggatggacttatccgcactaatgcaaaa
accagtatcggagaacatgtaaatattcgtaaagctgagtggaaagaagcaaagagtgta
actcttgcacctgtagctaagggcatgcagatctatgcgccgagtgaaacccttaaagct
atatttatgaaccgtacggtttcaaagggtgattttatttccactacaagtttaaggaaa
ttgaaggaaacggagacttttggcaaagaagttatgttcgaagatttcttccaggacttt
ttcggtgagggcttcgtgccatctttcgggcttggagaaataaaattgcaggtagtttct
acttttccatctgggatagtaaaaattacagactttactcaagttgagcttttgcctgaa
gcaatcgaagtaactcctgaacataatatttctactgttatgtacgaagatctgggtgga
ctgaaagaagccatcgggaaagtcagggaaatgatagagttgcctttgaagcatcctgag
ctttttgacaggctaggaatcgatgctccaaaaggggtattgctccatggtccgcccgga
acgggaaaaacaatgcttgcaaaagcagttgccaatgaatccgatgcttactttatttct
atcaatggccctgagattatgtccaaatattacggcgaatccgaaagggctataagggaa
attttcgagaacgcagaaaagaatgcccctgcaattatcttcctggatgagattgactcc
attgcccctaaaagggctgaggtaacaggagaggtcgaaaggagagtagttgctcaactt
ctctcccttatggacggacttaaagttcgcaagaatgtaattgttatagggtcaactaat
cgtcctgaagccctggatatagcgctccgtcgccctggcaggtttgaccgagaaattgaa
cttagagtccctgacactgatggaaggttagaaattttccagatccataccaggggaatg
cctcttgccgaagacgtaaatctcatggattttgctcaaatcacgtatgggttcgtggga
gctgatattgctgctctgtgcagggaggcagctatgagtgcactacggtgggttttgcct
aaaatcgatctcaatgaacctgaaattccggttgaaattctggactctcttcaggtaaca
agagaggattttgaaaatgctctcaaagatgtccggccttcagcaataagggaaatcctg
attgaagtgccagctgtcagctgggacgacatcggtggcctggaagaattaaaaaagctc
cttaaagaggtagtggaatggcctcttaagagtccggaatcttacagggatatcggggtt
gaggctcccaaaggagtccttctatacggccccccgggtacgggaaagactctgcttgca
aaagcaatagcccacgaatctgatgctaattttattgcagccaagggaagtgatctgctt
tccaaatggtacggagaatccgaaaaaaggatttctgaggtctttacacgggcaaggcag
gtagctccttcaattatttttcttgacgaacttgactcgcttgcacccgttcgcggagcc
tatgcaggtgagccacaggttacggcaagaatccttaatcagcttctctccgaaatggac
gggcttgaagagcttagggctgtagtagtaattggcgcaacgaatcgtcctgacgtcatt
gaccctgcacttattcgaccagggcgctttgatgaactgatccttgttccggttcctgat
gagggagctcgcatggagatctttaaggtccacactgaaaaaatgacactttctgaggat
gttgatctcgaaaagcttgtttctatgaccaatcagtatacaggtgcagatattgcagcc
gtgtgtaaaaaggcaggaaggcttgctttacgtgaagaccttcacgctaaagaggtgaag
cagaaacacttccttaaagcagcaacagaaaccagtccttcagtgacatcggacacaatg
aaatattacgaagctataaaaggcgaactccgaacaaggaaatctaaggagattgagaat
ctctcttacatttga
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