Methanosarcina barkeri 3: MSBR3_2549
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Entry
MSBR3_2549 CDS
T04533
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbak03016
]
MSBR3_2549
Enzymes [BR:
mbak01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
MSBR3_2549
Transfer RNA biogenesis [BR:
mbak03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
MSBR3_2549
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AKB83127
UniProt:
A0A0E3SND1
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All DBs
Position
complement(3392881..3394209)
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AA seq
442 aa
AA seq
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MKIYLESFGCSASQASAEIMKASVERLGHKLLLSEAADQAEVYICNSCTVKYTTEQKILY
KIRSMGEKNVEVIVSGCMPEVQLEDILHANPEAHILGVNAISRLGELLYSIEQRKRKGLS
GGERLEFRAYEPVGFLNVPRERSNPNIHICQISQGCNFACSYCIVKYARGKLHSFPPNEI
IEDIRSAVAEGCREIWLTSQDDSQYGMDTGVRLPELLRMISEIPGDFKVRVGMMNPFSVL
PILDDLVEAFDSDKVFKLLHLPIQSASHSVLKRMNRLHKMDVVDMIITKFRARFEDLSLF
TDIIVGFCDETDDEFKETVEWVQKYRPEKVNISRYSPRPHTKAFSFRNLDSRISVQRSHE
LHKVCEQVKLGSKQAMIGWKGRAFVSKYTEIGDVLTRTDAYRPVVISGSNLKPGQYADVE
IVAAKPGYFLGKLAEDRPASET
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctatctagaaagttttggctgttcagcgagccaggcatcagccgagataatg
aaggcaagcgtcgaaagactagggcataaactactgctatctgaggctgccgatcaggca
gaagtttatatctgcaattcctgtacggtaaagtacactacagaacagaagatcctgtat
aaaatccgcagtatgggcgagaagaatgtggaggttatcgtatccggttgtatgcctgaa
gtccagcttgaggatatcctgcatgcaaatcccgaagctcatatactgggagtaaatgcg
atttcccggcttggtgaacttctttactcaatcgaacagagaaaaaggaaaggtctgtca
ggaggagaacgtctggaattccgggcttacgaacctgttggctttctcaatgttccacgt
gaacgttccaatcctaatatccacatatgtcagatctcgcagggctgtaattttgcctgt
tcttactgcattgtaaaatatgcgagaggcaaactgcactcatttccaccgaatgaaatc
atcgaagacatccgttcagctgttgccgagggctgcagggaaatctggctcacttcccag
gacgacagccagtatggaatggatactggtgtcagacttccggaacttctgcgcatgatt
tcggaaatcccaggagatttcaaagtaagagtcggaatgatgaatcctttctctgtactc
ccaatcctcgatgatctggtagaagcttttgactccgacaaggtcttcaaactccttcac
ctcccaatccagtctgcttcccattccgtccttaagagaatgaaccgtctgcacaaaatg
gacgttgtggacatgataattacgaaattccgtgcccgttttgaagatttatccctattc
actgacataattgtaggtttctgcgatgaaaccgatgatgagttcaaagaaactgtcgaa
tgggtacagaaataccgtccagaaaaggttaatatttcaagatattctcctcgtcctcat
acgaaagccttttcctttagaaacctcgactccaggatttcagttcagcgttcccatgag
ctacataaagtttgtgaacaagtcaagcttgggtccaaacaagcaatgatcggctggaaa
ggtcgggcctttgtctcgaaatacacggaaatcggggatgtcctcacccgcacggatgct
taccgtccggttgttataagtggctcgaatctaaagcccggccagtatgcagatgtggaa
atcgttgctgcaaaacccggatattttcttgggaaattggctgaagatcggccagcttcc
gaaacataa
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