Methanosarcina barkeri 3: MSBR3_2799
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Entry
MSBR3_2799 CDS
T04533
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBR3_2799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbak03021
]
MSBR3_2799
Enzymes [BR:
mbak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBR3_2799
Transcription machinery [BR:
mbak03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBR3_2799
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
DUF826
RNase_II_C_S1
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
AKB83377
UniProt:
A0A0E3SNW4
LinkDB
All DBs
Position
complement(3700589..3701164)
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AA seq
191 aa
AA seq
DB search
MMKLVDTVRIPPTLLGEEVMQTVKNALREKLEGQVDKKLGSLVAICKIIEIGEGHILVGD
GAVYYDVTFEAIMFVPELQEIIEGEVVETVGFGVFVGMGPMDGLLHVSQITDDFISYDAK
NARLVTKNGGKSIAEGDHVRARVVAVSINEREPKESKIGLTMRQTALGKLQWLEEARKKK
QSHEAVPEEVA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctcgttgatacggtccgtatccctcctactcttttaggggaagaggtgatg
caaactgttaaaaacgcgttaagagaaaaactcgaggggcaggttgacaaaaaacttggt
tccctcgttgcgatttgcaagataatcgagataggggaagggcatatccttgtaggagac
ggggcagtatattatgacgttacgttcgaagcaataatgttcgtgcctgagctccaggag
attattgaaggtgaagttgttgaaactgttggtttcggagtttttgtagggatgggacca
atggacggcttgcttcacgtcagccagattacggacgattttatttcatatgatgccaag
aacgcaaggcttgtgacaaagaacggaggcaaatccattgctgaaggtgaccatgtaaga
gccagggttgtcgctgtaagtatcaacgaaagagaacctaaagaaagtaaaataggcctt
acaatgcgccagactgctcttggaaagctacagtggcttgaagaagcccgtaaaaagaag
cagtcgcatgaagcagttcctgaagaagttgcctga
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