Methanosarcina barkeri 3: MSBR3_2876
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Entry
MSBR3_2876 CDS
T04533
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbak03400
]
MSBR3_2876
DNA repair and recombination proteins [BR:
mbak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSBR3_2876
Archaeal homologous recombinant proteins
MSBR3_2876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKB83454
UniProt:
A0A0E3WYG1
LinkDB
All DBs
Position
3792711..3795935
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLYIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DVVFKGAENAKINLGFEHLGQDYLIEQAFRYSPKSENVSNSKCVLYANGESIIDQATRTY
EEVCSLLNMDEEAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVRRLQRDTSNSLSGVTAEIEGIESTEPHTVLNGLRQKIKDSNSILKKFNENKEAAAVQ
KEKLDLLITEHRERLQEIQGLKQALAKSQEDKTGCIREKEVFVGEAHEQRQALLGLGEEN
NLIREECGFGDLEIEALSLQQEKEEFLAREKVNAISKELALLLREEEVHAQALSNLENEK
IETERIFTQCRTDIGTTNGKIEENRKNILRIEDENKKLKEDAKVTTGFTDTYEIPLFIKE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNYRVTVRKSKTEIEILEEE
LRENEEAILGVQEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATI
RELDKVIRKNRQLLTEGKCPTCGQDLKGSEIACTTGESEQKKEKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRILDYDLEIERLKNKAKDFQERIAIHRSRTEEDSLKLEGLNKQKEE
LEAKIGKLLPDIKALQGWEAAAQKAHGESERVLREAKAFEKKLAGNASEIESLNGKIRTS
LALIENYGQRLEELSKKLKELAERETLEKEKLKVLEVELETLRKKEALAKETHNESAKRL
LKTKKLGANLIQMDNIKHKISELEASIRNLAEKVSFFDREILERNERIKQLEGKLEGSRF
EDLQSKRAQLVEYQATLTEKTRQITAAKDALLKEVGMVENSLNRRNELKDELKALENRQQ
YLEAVYSNAEELESMYMRVRADMRTKNIGALSTLLNEMFSFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLAMGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIAKL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcaaaaacctgtatattgaaaacatacggagttataaaaaactggattttaca
tttgaagacggagttacagtaatttccggagtgaacgggagtgggaagtccagtctgctt
gaggcctgttttatggggcttttcgggagcaaaatcctctcaaaggattttgtgcttgcg
gatgtggtcttcaagggggctgaaaatgcaaaaataaacctgggttttgagcatttaggg
caggattatcttatcgaacaggctttcaggtattcccctaaaagtgaaaacgtttcgaac
tcaaaatgcgtgctctatgccaatggggaaagtattatcgatcaggctacccggacttac
gaagaggtctgttcccttctgaatatggacgaagaggcatacagaaactgcgcttatatc
aggcagggtgaaattgacgtactcattaacgcaaaaccaaaagacaggcagcgaatgatt
gacggccttctacaacttggaaagctagaagaatacagggaaagagcgggcagtgcaaaa
acggctgtaagaaggcttcaaagagatacaagtaacagcctttcaggagtaacggctgaa
attgaaggaattgaaagtacagaaccgcatactgttttgaatgggctcaggcagaagata
aaggacagcaattcaatcttaaaaaaattcaatgagaataaagaggctgcagctgtccag
aaagaaaaactcgacctgctgattacagagcatagagaacgtctccaggaaatccagggt
cttaagcaggccctggctaaatctcaggaagacaagactggctgtatccgggaaaaagaa
gttttcgtcggagaagcccatgaacaacggcaggctctgctcggactgggagaagaaaat
aatcttattcgtgaagaatgcggctttggagaccttgagattgaggcactaagcttgcag
caggaaaaagaggagtttcttgccagggaaaaggtaaatgcgatctcaaaagaacttgct
ctcctcctcagagaagaagaggttcatgctcaggctctaagcaatcttgaaaacgaaaag
attgaaactgaacggatttttacgcagtgtaggacggatattgggactacaaacggaaaa
atcgaagaaaacaggaaaaatatactgagaatagaggatgagaataaaaagttaaaagaa
gatgcaaaagtgactacaggcttcacggatacttatgagattcctttattcataaaagag
ctggaagaaaaagagagccttctgcgtgaacgaaaaaacgaagcctcaacgaaacttgca
cttgcttttaaagaaaaagagacaggagatataaatcttctcacacttgataaggaactt
caaaattacagagtcacagtccgaaaaagtaaaaccgagatagaaatccttgaagaagag
ctcagggaaaatgaagaggcaatcctgggagtccaggagcaaaaatccgaagcttctgca
gggttaaagggtcttggctttaccggagaacaactcgaggacctggaatatttaagtgaa
cttctgctggaaaataaaaacaggttacacggacgggaaaaggagcttgaagctactatc
agggagcttgataaagtaatccgtaaaaaccggcagttgcttactgaaggaaaatgccct
acatgcggacaggatcttaaaggctctgaaattgcatgcacaaccggagaatccgaacag
aaaaaagaaaagcttgcagcagaacttctcgatataaaactccagcaggccgaagtcgag
aaaaaacttaatcggctcaaggatgcaaaaaaactggagaagcgaattttggattacgac
ctggaaattgaaagactcaaaaataaggcaaaggacttccaggaaaggatagctatccat
aggtcccgaaccgaggaagactctctaaaactcgaaggtcttaataaacaaaaggaggaa
cttgaggctaaaataggaaagctcctccctgatattaaagctctgcagggctgggaggct
gctgctcaaaaagcccatggtgagagtgaaagagtgcttcgagaggcaaaagcttttgag
aaaaaacttgctggaaacgcctcggaaattgagagccttaacggaaaaataaggacttcc
cttgcgctgatcgaaaattacgggcagaggcttgaggagctcagtaaaaaattaaaagaa
cttgccgaacgtgagactctggaaaaagaaaaactcaaagttctggaagttgaacttgaa
accctgaggaagaaggaagccctggcaaaagaaacccataacgagagtgcaaagcgtctc
ttgaagacaaagaaactcggggcaaacctgatccagatggataatataaagcataaaatc
tcagagcttgaggcttcaatcagaaaccttgctgaaaaagtcagcttctttgaccgggag
atccttgagagaaacgaacggataaagcagcttgaaggaaagctggagggaagcaggttc
gaagatcttcagtcaaagcgtgctcagcttgtagagtatcaggcaaccctcactgaaaaa
acccggcaaataacggctgctaaagatgcgctcttaaaagaagtaggaatggttgagaac
agcttaaaccggcgcaatgagctgaaagacgaactcaaagctcttgaaaacaggcagcag
tatcttgaagccgtatatagtaatgccgaggaacttgagagcatgtatatgcgcgttcgg
gctgatatgcggacaaaaaatataggggccctttctacccttttgaatgaaatgttcagc
ttcatgtacacaaacaatgcctattcccatatcgaacttgacccggaatataatctcacg
gtttacagaaaggacggcactccccttgaacccaaactccttagcggaggagaacgtgca
atctttaaccttgtcctgcgctgtgcaatctacaggcttcttgctatgggtttcggcgga
gacagggcagacgggcttcctcccatgatcctggacgagcccacagtttttctggaccgc
ggtcatataaaccagcttttgaaactaatagacatgatgcgcggtataggcgtaggccag
attattgtggtctcacatgacgaatcccttatagattcggcagaccatgtcttccaggta
gaaaaagaccctattaccaatatgtcatctattgcaaagctttaa
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