Methanosarcina barkeri 3: MSBR3_3096
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Entry
MSBR3_3096 CDS
T04533
Name
(GenBank) hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak00470
D-Amino acid metabolism
mbak01100
Metabolic pathways
mbak01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSBR3_3096
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MSBR3_3096
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mbak01011
]
MSBR3_3096
Enzymes [BR:
mbak01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MSBR3_3096
Peptidoglycan biosynthesis and degradation proteins [BR:
mbak01011
]
Precursor biosynthesis
Amino acid ligase
MSBR3_3096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_25
Dala_Dala_lig_C
Methyltransf_31
Methyltransf_11
Ubie_methyltran
Methyltransf_23
Methyltransf_12
TehB
ATPgrasp_Ter
MTS
CMAS
CheR
Anamorsin_N
ATP-grasp_4
mRNA_G-N7_MeTrfase
MetW
ATP-grasp_3
TTL
Methyltransf_29
DRE2_N
Motif
Other DBs
NCBI-ProteinID:
AKB83674
UniProt:
A0A0E3WYA4
LinkDB
All DBs
Position
4084725..4086833
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AA seq
702 aa
AA seq
DB search
MTQNNTDLNTRRKRARCTVQKKTFGPVEDLETHVRSDWWQTLFNSLYLKTDADLLDDMEV
TRKEVDLIVSILGVAPEEKILDLCCGQGRHVLELARRGFSNVEGYDRSQYLIRKARTRAQ
KENLQVRFREGDARKLPYPSDTFDVVTILGNSFGYFDSTLQDQKVLEEIFRVLKPDGRVF
IDAVDGDYMKKSFQPRSWEWLDRKYFVCRERALSADGDRLICREVISRIDKGVIADQFYA
ERLYNKESLFELLTVSGFSSPAFHTTFSPVSAGTQDAGMMEQRILVSASVEKPWPTSLQA
IGNKKPMSIAVLLGDPRKEDQVKPACVFDDDDFDTLERMKKALAEIPFMKFTFLDRHETL
LEDLKKKAAKIDLVLNLCDEGFYNDPTKELHVPALLEQLNVPYTGAGPQCLAFCYDKSII
RGVAREMRIPVAKGMLVTEDAELSKLSLSFPLLVKPNSGDSSFGITQKSIAHNREELLEI
LAASREKMGSCRPFLLEEFLPGKDISVGIIGNPPSCNVLPITEEDYSEVPEEFPKICGYE
AKWLPDSPYWNIKSVPADLPEKTRKEIIKCCLALFTRLGCRDYARFDWRLDAEGKPKLLE
VNPNPGWCWDGHLAKMAAYANISYSGMLAAIIEAAKERYGLGASENLELRKMPGTTSRKS
PAECAAEFEEEIEARSSMDSENTGKKSVFSSSSETVQAFESV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaataatacagatctaaataccaggcgtaagcgcgccaggtgtactgtacag
aagaaaacctttgggcctgttgaagaccttgaaactcacgtccggtccgactggtggcaa
actctttttaactcactttaccttaagaccgatgccgatcttctggatgatatggaggtt
actagaaaagaggtcgatctcattgtttccattttgggggtggctccggaagaaaaaatt
cttgatctatgttgcggacaggggagacacgtacttgaactggcaagaagaggcttttca
aacgtagagggatatgacagatctcagtaccttataaggaaagccagaacaagagcacag
aaagagaacctgcaggtaaggttcagagagggagatgcaagaaagcttccttacccatct
gatacttttgacgtggttactatactgggtaacagttttggctactttgactcaacgctc
caggaccaaaaggtccttgaagaaatatttagggttctgaagcctgatggcagagttttc
atcgatgccgtagatggagactacatgaaaaagagttttcagcccaggtcatgggaatgg
cttgacaggaaatactttgtctgcagggaaagagctctttcggccgatggagatcggtta
atttgcagagaagtgataagccgtattgacaaaggcgtgattgcagaccaattttacgct
gagaggttatacaataaagaaagcctctttgagctgcttacagtgtcgggatttagtagt
cccgcctttcatactactttcagcccggtttccgcaggaacccaggatgcaggcatgatg
gaacagagaattctggtctcggcctctgttgaaaaaccttggcctacgtctcttcaggca
atcgggaataaaaaaccaatgagtattgcagttttgcttggagatccgagaaaagaagat
caggttaagcccgcctgtgtcttcgatgacgatgattttgatacccttgagagaatgaaa
aaagcacttgcagagattccttttatgaaatttacttttcttgacaggcatgaaacgtta
cttgaggatctgaagaagaaagcggcgaaaattgatcttgtacttaatctctgtgatgaa
ggattttataacgatcccacaaaagaacttcatgtcccggctttgcttgaacagttaaat
gtcccgtatacaggagcaggtcctcaatgtcttgctttttgttatgacaaatccattata
aggggagttgccagagagatgcgcattcccgtagcaaagggaatgcttgtaaccgaagat
gcagagctttcaaagctgtctctctctttccccttgcttgtaaagcccaactcaggggac
tcaagttttgggattacacagaaaagcattgcccataaccgtgaggagcttcttgaaatt
cttgcggcatcccgagaaaagatgggctcttgtaggcctttcctgctggaagagtttctt
ccaggaaaagacatcagtgttgggattattggaaatccgccttcatgcaatgtactgcct
attacggaagaagattactcggaagtacctgaagagtttccaaagatttgcgggtatgag
gcgaagtggcttccggattctccttactggaacataaagtccgtgcctgctgatctccct
gaaaaaaccagaaaggaaatcataaagtgctgtcttgctctctttacaaggctgggttgc
cgtgattatgcccgttttgactggagacttgatgccgaaggcaaacccaaacttctagaa
gtgaaccctaatccaggatggtgctgggacggtcatttggcaaagatggcagcttatgct
aatatttcctattccggaatgcttgcggccattatagaagctgcaaaagaaaggtatggt
cttggagcttctgaaaatctcgagctgaggaaaatgcctggaaccacttccagaaaaagc
ccggctgaatgcgctgccgagtttgaagaagaaattgaagcaagaagctctatggattcg
gaaaataccgggaagaaaagtgttttctcaagttcctccgaaacggtacaggcttttgag
agcgtatga
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