Methanosarcina barkeri 3: MSBR3_3112
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Entry
MSBR3_3112 CDS
T04533
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mbak03036
]
MSBR3_3112
Chromosome and associated proteins [BR:
mbak03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MSBR3_3112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
MscS_porin
DUF724
Motif
Other DBs
NCBI-ProteinID:
AKB83690
UniProt:
A0A0E3WYQ2
LinkDB
All DBs
Position
4106218..4109745
Genome browser
AA seq
1175 aa
AA seq
DB search
MYIKEIEFVNFKSFGKKVKIPFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK
LTDLIYNGDASKKPDFAQVTIRFDNSDHKLPLELDEVEVSRKIRRTKSGYYSYFYFNGKA
VSLGEIHSQLEKAGITPEGYNVVMQGDVTQIISMTSVERRKIIDEIAGVAEFDERKQKAL
DELEVVRQQIERVDIILEEVRTQLEKLAGERDQALKYQALKAEKVKFEGYLLLSKLKDAR
AELQNIDKELTGKEEHLEKVQLLLNERMKELQALEENLEELSVEIRKKGEDEQLQVKREI
EEIKGEISRCVDSIELSESELEEADSRRRKAFVEIDSTKGKVRELEEKIEAENLRKESIS
SELSERKTERMLLQSKIADVDAKFAATRDELMTVRKKLEDVKNEKNELIRTEDRLLDTLR
RKSLELREIENQIRDAEAAVATSDSDTLSVRYELEKLSENLESLIRDRDDIESSHFRIKE
DIRKLENKLHSLQQEYTITEARVRASEQGGGYSRSVEMVIGAARQEDLFGIHGTIAQLGR
VDRQYSIALEVAAGNRMQAIVVDTDADAAEAIEYLKRRKGGRATFLPLNKMKEPRRLENL
SYEDGVIGYAIDLIQFDSDFEPAFWYVFQDTLVMENLASARRLMGKARMVTLEGELLEKS
GAMVGGSVSSKSGASFAAAEKDKLLELAEEIRSLDASRSAAISKQDSIESHLFELSRKIR
DCEATISRKENQLEEISGREAKLAELLEFKQADLKLIEESRTELGTEMEKVSAEKSDKEK
IVSELEEQISGLETKLADSPLPEINKKIEFVDEELRRLDGRIRDTEATLNALQLEKEYTE
QKITEAKEVIRELDEKKASRMEKVNYLKIKIKEFEEKLEEKKVREVELSDELLGLQQERE
KVQVEYNAVKRRVSIASTTLEKAKQQVLTLTATKNALLDQEKQFAEEILKRGIEETDEVP
NYETVYMRIQAIDEALRQLEPVNMRAIDEYNEVQLRLSDLQGKRDTLFTEREQLLERIEQ
YEHLKRDAFMEAYTSINSNFKEIFHELSDGMGELLLDDPDDPFAGGMTLRAQPKEKTLQR
IEAMSGGEKSLTALAFIFAIQQYRPAPFYAFDEIDMFLDGWNVERVSRRVKTSGSKVQFI
VVSLRKPMIQAASRTIGVTMQENNLTSITGVRLNG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgtatataaaagagattgaatttgttaactttaagtctttcggaaaaaaagtaaagatt
cccttttataatgactttactacaatttcgggtccgaacgggagtgggaagtctaacata
atagacgggattctttttgcactcgggctcacaagttcaaggactcttcgtgctgaaaaa
cttaccgatctgatttataacggcgatgcgtcaaaaaagcctgattttgctcaggttacg
atccgttttgataactctgaccataagttacctttagagcttgatgaagttgaggtctca
agaaagatccggcggacaaaaagcgggtactacagctatttttatttcaatggaaaagcc
gtaagtcttggagagatccattcccagcttgaaaaagccggaataacgcctgaaggctac
aatgtggttatgcagggagatgtaacgcaaattatctccatgacctccgtagaaagaaga
aagattatagacgaaatcgcaggagttgcggagtttgacgaacgaaagcaaaaggcactt
gatgaactggaagttgtaaggcagcaaatcgaacgagtggatataatccttgaagaggta
cgcactcagttagaaaaacttgcaggggaacgggaccaggccttaaaataccaggcactc
aaggctgaaaaagtaaaatttgaaggatatctcctgctttccaaactcaaggacgccagg
gctgaactgcaaaatattgataaggaactcacaggcaaggaagaacaccttgaaaaagtc
cagctactcctgaacgaaagaatgaaggaacttcaagctcttgaagaaaacctggaagag
ctttcagtcgaaatccgaaagaaaggagaggatgaacagcttcaggttaagagggagatc
gaagaaataaagggagaaatttctcgctgcgtagatagtatagagctttcggaatccgaa
cttgaagaagctgactcacgacgcaggaaagcctttgtagaaatcgattccaccaagggc
aaggtaagggaactagaagaaaagattgaagccgaaaacctgagaaaagaaagcatttct
tcagagctttccgagcgtaaaacggaacgcatgctgctccagagcaagattgcggatgta
gacgcaaaatttgctgctacacgggatgagctcatgactgtcaggaagaaactggaagat
gtaaaaaatgaaaaaaacgagctgatccgaacagaggaccgacttcttgacacactcagg
agaaaatcattggaacttcgggagatcgaaaaccagattcgagacgctgaagcagcagtt
gctacttctgacagtgatacgctttctgtcaggtacgagcttgaaaagctttccgaaaat
ctggaatctcttattcgggaccgtgatgatatcgaaagcagccatttcaggataaaggaa
gatataaggaaacttgaaaacaaactccacagcctccagcaggagtacacaatcacggag
gcaagagtgcgggcatctgaacagggcggaggctattccaggtctgtggaaatggtaata
ggggctgctaggcaggaagatctttttggaattcacgggaccattgcccagcttggaaga
gtggacaggcaatactcaatagctctggaagttgctgcaggaaaccgaatgcaggcaatt
gttgtggatactgatgccgatgctgccgaagcaatcgaatacctgaagcgtaggaaagga
ggaagagctaccttccttcccctcaataaaatgaaagagcccaggcggcttgaaaacctg
agttacgaagatggagtaatagggtacgcaattgaccttattcagtttgattccgatttt
gaacctgctttctggtatgtttttcaggacactcttgttatggaaaaccttgcaagtgcc
cgtcgcctcatgggaaaggcgagaatggtaacccttgaaggcgaacttctggaaaaaagc
ggagcaatggtaggaggatcagtttcctctaaatcaggagcttcttttgcggctgcagaa
aaagataaactgcttgaacttgcagaggagatcaggtccctggatgcaagccggagtgca
gccataagcaagcaggacagtattgaaagccatcttttcgagcttagcaggaaaattcga
gactgtgaagctacgatctcaagaaaagagaaccagcttgaggaaatttcaggcagggaa
gcaaaacttgctgaacttcttgaattcaaacaggccgaccttaaattaatcgaggagtcc
agaaccgaactcggaactgaaatggaaaaggtatctgcagagaaatccgacaaagaaaag
atcgtatccgagcttgaggagcagatctcagggcttgaaactaaacttgctgattcccct
ctgcctgaaatcaacaaaaaaatcgaattcgttgacgaagaactccgcaggctagatggc
cgaatacgggatactgaagccacattaaacgccttgcagcttgaaaaagagtataccgaa
cagaaaattactgaagcaaaggaagttatcagggaacttgatgagaagaaagcttcaaga
atggagaaagttaattatctaaagataaaaataaaggagtttgaagaaaagcttgaagaa
aagaaagtcagggaggttgaactttcggatgaactactaggtcttcagcaagaacgggaa
aaagttcaggttgaatacaatgcggtcaaacgcagggtaagtattgcctcaaccacactt
gaaaaagcgaagcagcaggttcttacgctcacagctactaaaaatgcgctcttagatcag
gaaaagcaatttgccgaagaaatcctgaaaagaggcatagaagagactgacgaagtccct
aattacgaaactgtttatatgcggattcaggcaatcgatgaagccctcaggcaactcgag
cccgtaaacatgcgagcaattgacgagtataatgaggtacagttaaggctttcggatttg
cagggaaagcgggatactctatttaccgaaagagagcagctccttgagcgcattgaacag
tatgagcatttaaagcgagatgcctttatggaagcttatacaagcattaattccaacttc
aaggagattttccatgagctttctgacgggatgggtgaactcttgcttgatgaccctgat
gacccttttgcaggaggaatgacacttcgggcacagccaaaagaaaaaactctccagagg
atcgaggcaatgtccggaggggaaaagagtcttactgcacttgctttcattttcgcgatc
caacaataccgtcctgctcctttctatgcttttgatgaaattgatatgtttctggacggc
tggaacgtggagagggtttcaaggcgcgttaaaacctcaggatcaaaagtccagtttatt
gttgtttccttaagaaaacctatgatccaggccgcatccaggacaataggggttacaatg
caggaaaataatctcacaagcattaccggagtgagacttaatggctga
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